Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22250

Experiment: Ra1_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.01
1,352,605	+		ABZR87_RS22245	0.60	-2.1
1,352,606	-		ABZR87_RS22245	0.60	-0.7
1,352,606	-		ABZR87_RS22245	0.60	-1.4
1,352,632	+		ABZR87_RS22245	0.61	-1.5
1,352,633	-		ABZR87_RS22245	0.61	-1.0
1,352,633	-		ABZR87_RS22245	0.61	-1.0
1,352,659	+		ABZR87_RS22245	0.63	-1.6
1,352,659	+		ABZR87_RS22245	0.63	-2.0
1,352,659	+		ABZR87_RS22245	0.63	+0.0
1,352,701	+		ABZR87_RS22245	0.65	-1.8
1,352,701	+		ABZR87_RS22245	0.65	-0.9
1,352,701	+		ABZR87_RS22245	0.65	-1.5
1,352,701	+		ABZR87_RS22245	0.65	+0.2
1,352,701	+		ABZR87_RS22245	0.65	-0.9
1,352,701	+		ABZR87_RS22245	0.65	-1.3
1,352,701	+		ABZR87_RS22245	0.65	-0.6
1,352,701	+		ABZR87_RS22245	0.65	-1.4
1,352,702	-		ABZR87_RS22245	0.65	-1.1
1,352,702	-		ABZR87_RS22245	0.65	-0.5
1,352,702	-		ABZR87_RS22245	0.65	-0.6
1,353,088	+		ABZR87_RS22245	0.85	-1.0
1,353,088	+		ABZR87_RS22245	0.85	-0.8
1,353,088	+		ABZR87_RS22245	0.85	-1.8
1,353,088	+		ABZR87_RS22245	0.85	-1.4
1,353,088	+		ABZR87_RS22245	0.85	-1.2
1,353,088	+		ABZR87_RS22245	0.85	+1.4
1,353,088	+		ABZR87_RS22245	0.85	-1.2
1,353,089	-		ABZR87_RS22245	0.85	-1.7
1,353,089	-		ABZR87_RS22245	0.85	-2.0
1,353,089	-		ABZR87_RS22245	0.85	-1.3
1,353,089	-		ABZR87_RS22245	0.85	-1.2
1,353,089	-		ABZR87_RS22245	0.85	-0.8
1,353,089	-		ABZR87_RS22245	0.85	-0.8
1,353,089	-		ABZR87_RS22245	0.85	-0.8
1,353,089	-		ABZR87_RS22245	0.85	-0.3
1,353,089	-		ABZR87_RS22245	0.85	-0.4
1,353,089	-		ABZR87_RS22245	0.85	-0.6
1,353,182	-		ABZR87_RS22245	0.90	-1.8
1,353,182	-		ABZR87_RS22245	0.90	-1.0
1,353,182	-		ABZR87_RS22245	0.90	-0.9
1,353,182	-		ABZR87_RS22245	0.90	-1.6
1,353,182	-		ABZR87_RS22245	0.90	-2.1
1,353,182	-		ABZR87_RS22245	0.90	-0.8
1,353,223	+				-1.0
1,353,238	+				-1.9
1,353,239	-				+0.1
1,353,281	-				-0.6
1,353,363	-				+0.1
1,353,383	+				+0.0
1,353,383	+				-0.4
1,353,383	+				-1.7
1,353,383	+				-1.3
1,353,383	+				-1.4
1,353,383	+				-0.2
1,353,383	+				-0.8
1,353,384	-				+0.8
1,353,384	-				-0.5
1,353,384	-				+0.2
1,353,384	-				-0.3
1,353,384	-				-1.4
1,353,384	-				-0.8
1,353,384	-				-0.2
1,353,384	-				+0.9
1,353,384	-				-0.9
1,353,384	-				+1.0
1,353,384	-				-0.6
1,353,384	-				-0.8
1,353,384	-				-1.3
1,353,384	-				-1.8
1,353,384	-				-0.3
1,353,420	+				-1.0
1,353,420	+				-1.7
1,353,421	-				-1.1
1,353,421	-				+0.4
1,353,421	-				+0.4
1,353,421	-				-0.6
1,353,427	+				-0.5
1,353,428	-				-1.3
1,353,428	-				-0.1
1,353,539	+				+0.1
1,353,539	+				-1.2
1,353,539	+				-0.4
1,353,540	-				-1.5
1,353,558	-				-1.7
1,353,558	-				-0.3
1,353,659	+		ABZR87_RS22250	0.15	-0.2
1,353,659	+		ABZR87_RS22250	0.15	-3.0
1,353,659	+		ABZR87_RS22250	0.15	-2.5
1,353,660	-		ABZR87_RS22250	0.15	+0.3
1,353,690	-		ABZR87_RS22250	0.18	-1.0
1,353,734	+		ABZR87_RS22250	0.22	-0.7
1,353,734	+		ABZR87_RS22250	0.22	-1.4
1,353,735	-		ABZR87_RS22250	0.22	-0.1
1,353,744	+		ABZR87_RS22250	0.23	-1.4
1,353,790	-		ABZR87_RS22250	0.27	-0.6
1,353,790	-		ABZR87_RS22250	0.27	-0.9
1,353,939	-		ABZR87_RS22250	0.41	+0.4
1,353,939	-		ABZR87_RS22250	0.41	-2.6
1,353,939	-		ABZR87_RS22250	0.41	-1.8
1,354,218	+		ABZR87_RS22250	0.66	-0.8
1,354,218	+		ABZR87_RS22250	0.66	-1.0
1,354,219	-		ABZR87_RS22250	0.66	-0.2
1,354,219	-		ABZR87_RS22250	0.66	-1.8
1,354,379	+		ABZR87_RS22250	0.81	-1.5
1,354,379	+		ABZR87_RS22250	0.81	-0.0
1,354,379	+		ABZR87_RS22250	0.81	-1.6
1,354,379	+		ABZR87_RS22250	0.81	-1.0
1,354,379	+		ABZR87_RS22250	0.81	-0.4
1,354,380	-		ABZR87_RS22250	0.81	-1.9
1,354,380	-		ABZR87_RS22250	0.81	-1.9
1,354,380	-		ABZR87_RS22250	0.81	-0.6
1,354,509	+				-0.4
1,354,509	+				-0.6
1,354,509	+				-0.9
1,354,509	+				-0.1
1,354,509	+				-1.0
1,354,510	-				-1.6
1,354,510	-				-2.1
1,354,510	-				-3.6
1,354,510	-				-2.2
1,355,098	+		ABZR87_RS22255	0.44	-0.2
1,355,295	+		ABZR87_RS22255	0.62	+0.8
1,355,295	+		ABZR87_RS22255	0.62	-1.1
1,355,295	+		ABZR87_RS22255	0.62	-1.2
1,355,295	+		ABZR87_RS22255	0.62	-1.6
1,355,510	-		ABZR87_RS22255	0.81	-1.2