Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16180

Experiment: Ra1_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.01
3,422,244	+				-0.1
3,422,245	-				-0.2
3,422,341	+				-1.6
3,422,341	+				-0.9
3,422,342	-				-0.3
3,422,342	-				-0.3
3,422,463	+		ABZR87_RS16175	0.12	-1.5
3,422,463	+		ABZR87_RS16175	0.12	-0.1
3,422,464	-		ABZR87_RS16175	0.12	-1.3
3,422,464	-		ABZR87_RS16175	0.12	+0.5
3,422,464	-		ABZR87_RS16175	0.12	-0.9
3,422,464	-		ABZR87_RS16175	0.12	-1.0
3,422,552	+		ABZR87_RS16175	0.24	-0.7
3,422,552	+		ABZR87_RS16175	0.24	-0.1
3,422,553	-		ABZR87_RS16175	0.24	+0.2
3,422,553	-		ABZR87_RS16175	0.24	+0.0
3,422,553	-		ABZR87_RS16175	0.24	+0.0
3,422,594	+		ABZR87_RS16175	0.30	-1.1
3,422,594	+		ABZR87_RS16175	0.30	+0.6
3,422,595	-		ABZR87_RS16175	0.30	-1.9
3,422,595	-		ABZR87_RS16175	0.30	+0.7
3,422,595	-		ABZR87_RS16175	0.30	-0.5
3,422,764	+		ABZR87_RS16175	0.53	+0.6
3,422,804	+		ABZR87_RS16175	0.58	+0.3
3,422,804	+		ABZR87_RS16175	0.58	+0.0
3,422,804	+		ABZR87_RS16175	0.58	+0.6
3,422,805	-		ABZR87_RS16175	0.59	-0.3
3,423,105	+				-0.1
3,423,105	+				+0.1
3,423,196	+				-0.4
3,423,221	+				+0.2
3,423,351	+				-1.0
3,423,352	-				-0.5
3,423,428	-				-1.3
3,423,537	+		ABZR87_RS16180	0.13	+0.8
3,423,537	+		ABZR87_RS16180	0.13	-1.9
3,423,538	-		ABZR87_RS16180	0.13	-1.9
3,423,538	-		ABZR87_RS16180	0.13	-1.5
3,423,538	-		ABZR87_RS16180	0.13	-1.7
3,423,538	-		ABZR87_RS16180	0.13	-1.2
3,423,684	+		ABZR87_RS16180	0.20	-1.2
3,423,685	-		ABZR87_RS16180	0.20	-1.0
3,423,772	-		ABZR87_RS16180	0.24	-1.7
3,424,220	-		ABZR87_RS16180	0.43	-1.6
3,424,230	+		ABZR87_RS16180	0.44	-1.3
3,424,248	+		ABZR87_RS16180	0.45	-1.0
3,424,249	-		ABZR87_RS16180	0.45	-1.2
3,424,249	-		ABZR87_RS16180	0.45	-1.6
3,424,252	+		ABZR87_RS16180	0.45	+0.8
3,424,253	-		ABZR87_RS16180	0.45	-1.0
3,424,494	+		ABZR87_RS16180	0.55	-1.0
3,424,495	-		ABZR87_RS16180	0.55	+0.8
3,424,495	-		ABZR87_RS16180	0.55	-0.5
3,424,510	-		ABZR87_RS16180	0.56	-1.0
3,424,789	+		ABZR87_RS16180	0.68	-0.5
3,424,789	+		ABZR87_RS16180	0.68	-1.5
3,425,013	+		ABZR87_RS16180	0.78	-1.0
3,425,013	+		ABZR87_RS16180	0.78	-1.7
3,425,014	-		ABZR87_RS16180	0.78	-0.2
3,425,202	+		ABZR87_RS16180	0.86	+0.3
3,425,382	+				-0.5
3,425,383	-				+1.8
3,425,383	-				-0.7
3,425,535	+				+0.5
3,425,536	-				-0.3
3,425,588	-				+0.0
3,425,624	-				-1.0
3,425,644	+		ABZR87_RS16185	0.10	-1.2
3,425,645	-		ABZR87_RS16185	0.10	+2.8
3,425,730	-		ABZR87_RS16185	0.25	+0.8
3,425,730	-		ABZR87_RS16185	0.25	-0.7
3,425,864	-		ABZR87_RS16185	0.49	-1.3
3,426,165	+				-0.2
3,426,166	-				-1.4
3,426,166	-				+0.3
3,426,166	-				-0.2
3,426,272	+				-0.5
3,426,272	+				-0.3
3,426,272	+				+1.4
3,426,273	-				+1.2
3,426,273	-				-0.0
3,426,328	-				-0.3
3,426,441	+		ABZR87_RS16190	0.11	+0.5
3,426,441	+		ABZR87_RS16190	0.11	-1.4
3,426,441	+		ABZR87_RS16190	0.11	-1.0
3,426,441	+		ABZR87_RS16190	0.11	-0.8
3,426,441	+		ABZR87_RS16190	0.11	-0.2
3,426,442	-		ABZR87_RS16190	0.11	-0.9