Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13500

Experiment: Ra1_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.01
2,862,135	+				-0.2
2,862,135	+				+0.2
2,862,136	-				-0.7
2,862,227	+				+0.2
2,862,227	+				-0.5
2,862,227	+				+0.2
2,862,365	-		ABZR87_RS13495	0.21	+0.5
2,862,394	+		ABZR87_RS13495	0.24	+0.2
2,862,394	+		ABZR87_RS13495	0.24	-0.7
2,862,395	-		ABZR87_RS13495	0.25	-2.0
2,862,505	+		ABZR87_RS13495	0.38	+0.2
2,862,505	+		ABZR87_RS13495	0.38	-0.5
2,862,505	+		ABZR87_RS13495	0.38	-0.9
2,862,505	+		ABZR87_RS13495	0.38	-0.3
2,862,544	+		ABZR87_RS13495	0.43	-0.4
2,862,544	+		ABZR87_RS13495	0.43	-0.2
2,862,545	-		ABZR87_RS13495	0.43	-1.0
2,862,586	+		ABZR87_RS13495	0.48	-1.4
2,862,587	-		ABZR87_RS13495	0.48	-0.0
2,862,587	-		ABZR87_RS13495	0.48	+0.8
2,862,839	-		ABZR87_RS13495	0.79	-0.8
2,863,003	+				-1.6
2,863,003	+				+0.5
2,863,004	-				+0.5
2,863,145	+		ABZR87_RS13500	0.28	-0.8
2,863,145	+		ABZR87_RS13500	0.28	-0.1
2,863,146	-		ABZR87_RS13500	0.28	-0.4
2,863,360	-		ABZR87_RS13500	0.74	-0.7
2,863,360	-		ABZR87_RS13500	0.74	+0.1
2,863,360	-		ABZR87_RS13500	0.74	-2.7
2,863,480	-				-0.5
2,863,492	+				-0.9
2,863,492	+				-0.0
2,863,493	-				+0.1
2,863,493	-				+1.8
2,863,493	-				-1.0
2,863,621	+		ABZR87_RS13505	0.16	+0.2
2,863,621	+		ABZR87_RS13505	0.16	-0.5
2,863,621	+		ABZR87_RS13505	0.16	-0.4
2,863,621	+		ABZR87_RS13505	0.16	-0.4
2,863,621	+		ABZR87_RS13505	0.16	-0.1
2,863,622	-		ABZR87_RS13505	0.17	-1.0
2,863,622	-		ABZR87_RS13505	0.17	-1.0
2,863,850	+		ABZR87_RS13505	0.45	+0.9
2,863,850	+		ABZR87_RS13505	0.45	-0.3
2,863,850	+		ABZR87_RS13505	0.45	-0.0
2,863,851	-		ABZR87_RS13505	0.45	+1.0
2,863,851	-		ABZR87_RS13505	0.45	-0.6
2,863,851	-		ABZR87_RS13505	0.45	-0.6
2,863,885	+		ABZR87_RS13505	0.49	+0.4
2,863,885	+		ABZR87_RS13505	0.49	+1.2
2,863,885	+		ABZR87_RS13505	0.49	+0.7
2,863,885	+		ABZR87_RS13505	0.49	-1.5
2,863,886	-		ABZR87_RS13505	0.49	-1.1
2,863,886	-		ABZR87_RS13505	0.49	+0.0
2,863,886	-		ABZR87_RS13505	0.49	+0.2
2,864,033	+		ABZR87_RS13505	0.68	-0.5
2,864,098	+		ABZR87_RS13505	0.76	-0.3
2,864,318	-				-0.5
2,864,318	-				-0.2
2,864,336	-				+0.7
2,864,371	+				+0.6
2,864,371	+				-0.5
2,864,387	+				+0.1
2,864,388	-				+0.3
2,864,388	-				+0.7
2,864,388	-				-0.1
2,864,388	-				+1.8
2,864,388	-				-0.8
2,864,388	-				+0.2
2,864,388	-				-0.4
2,864,436	+		ABZR87_RS13510	0.13	+0.4
2,864,437	-		ABZR87_RS13510	0.13	-0.4
2,864,437	-		ABZR87_RS13510	0.13	+0.1
2,864,437	-		ABZR87_RS13510	0.13	+1.8