Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12855

Experiment: Ra1_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.01
2,733,602	+				+0.5
2,733,603	-				+0.2
2,733,672	-		ABZR87_RS12845	0.22	-0.2
2,733,884	+		ABZR87_RS12845	0.62	+0.0
2,733,884	+		ABZR87_RS12845	0.62	-0.9
2,733,885	-		ABZR87_RS12845	0.62	+0.1
2,733,885	-		ABZR87_RS12845	0.62	-0.6
2,734,019	+		ABZR87_RS12845	0.87	+0.3
2,734,028	+		ABZR87_RS12845	0.89	+0.1
2,734,028	+		ABZR87_RS12845	0.89	+2.8
2,734,029	-		ABZR87_RS12845	0.89	-1.0
2,734,029	-		ABZR87_RS12845	0.89	-1.0
2,734,216	+				+0.4
2,734,216	+				+0.4
2,734,216	+				-0.0
2,734,217	-				+0.1
2,734,253	+				-0.0
2,734,253	+				+0.3
2,734,253	+				-0.9
2,734,254	-				-1.1
2,734,254	-				-0.2
2,734,254	-				-0.2
2,734,254	-				+0.1
2,734,254	-				-0.6
2,734,254	-				+2.2
2,734,482	-				-0.8
2,734,681	+				+0.3
2,734,681	+				-0.3
2,734,681	+				+0.3
2,734,712	+		ABZR87_RS12855	0.12	+0.0
2,734,712	+		ABZR87_RS12855	0.12	-0.3
2,734,712	+		ABZR87_RS12855	0.12	-1.5
2,734,713	-		ABZR87_RS12855	0.12	+1.1
2,734,713	-		ABZR87_RS12855	0.12	-0.3
2,734,713	-		ABZR87_RS12855	0.12	+0.5
2,734,817	+		ABZR87_RS12855	0.19	-0.7
2,734,818	-		ABZR87_RS12855	0.20	-0.3
2,734,890	-		ABZR87_RS12855	0.25	-1.3
2,734,943	+		ABZR87_RS12855	0.28	-0.7
2,734,943	+		ABZR87_RS12855	0.28	+0.5
2,734,944	-		ABZR87_RS12855	0.29	+0.4
2,734,944	-		ABZR87_RS12855	0.29	+1.1
2,735,077	+		ABZR87_RS12855	0.38	-0.9
2,735,078	-		ABZR87_RS12855	0.38	+0.5
2,735,121	-		ABZR87_RS12855	0.41	+0.3
2,735,168	+		ABZR87_RS12855	0.44	-1.0
2,735,168	+		ABZR87_RS12855	0.44	+0.1
2,735,168	+		ABZR87_RS12855	0.44	-1.1
2,735,168	+		ABZR87_RS12855	0.44	-0.7
2,735,169	-		ABZR87_RS12855	0.44	+1.2
2,735,287	-		ABZR87_RS12855	0.53	-0.1
2,735,287	-		ABZR87_RS12855	0.53	-0.5
2,735,287	-		ABZR87_RS12855	0.53	-0.1
2,735,442	+		ABZR87_RS12855	0.64	-1.6
2,735,471	+		ABZR87_RS12855	0.66	+0.4
2,735,607	-		ABZR87_RS12855	0.76	-0.8
2,735,639	-		ABZR87_RS12855	0.78	-0.1
2,735,639	-		ABZR87_RS12855	0.78	+0.3
2,735,837	+				+0.3
2,735,838	-				+2.8
2,735,838	-				-0.2
2,735,843	+				-0.3
2,735,844	-				-0.8
2,735,844	-				-0.6
2,735,844	-				-0.4
2,735,852	+				-0.5
2,735,966	+				+0.7
2,735,966	+				-0.2
2,735,967	-				-0.1
2,735,967	-				-1.1
2,736,025	+				-0.2
2,736,026	-				-0.9
2,736,106	+				-0.1
2,736,138	+				+0.3
2,736,139	-				+0.3
2,736,139	-				-0.1
2,736,187	-		ABZR87_RS12860	0.13	-0.1
2,736,187	-		ABZR87_RS12860	0.13	+1.0
2,736,187	-		ABZR87_RS12860	0.13	+0.2
2,736,223	+		ABZR87_RS12860	0.16	+0.8
2,736,224	-		ABZR87_RS12860	0.16	+0.2
2,736,224	-		ABZR87_RS12860	0.16	+0.4
2,736,224	-		ABZR87_RS12860	0.16	-0.1
2,736,224	-		ABZR87_RS12860	0.16	-0.3
2,736,492	+		ABZR87_RS12860	0.39	-0.5
2,736,492	+		ABZR87_RS12860	0.39	-0.8
2,736,492	+		ABZR87_RS12860	0.39	-0.9
2,736,492	+		ABZR87_RS12860	0.39	+0.3
2,736,493	-		ABZR87_RS12860	0.39	+0.3
2,736,501	+		ABZR87_RS12860	0.40	+0.0
2,736,561	+		ABZR87_RS12860	0.45	+1.3
2,736,603	+		ABZR87_RS12860	0.48	+0.1
2,736,603	+		ABZR87_RS12860	0.48	+0.6
2,736,603	+		ABZR87_RS12860	0.48	+0.5
2,736,604	-		ABZR87_RS12860	0.48	+0.6
2,736,789	+		ABZR87_RS12860	0.64	+0.2
2,736,789	+		ABZR87_RS12860	0.64	-0.4
2,736,790	-		ABZR87_RS12860	0.64	-0.3