Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11940

Experiment: Ra1_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.01
2,535,883	-				+0.1
2,535,912	+				-0.7
2,535,912	+				+1.2
2,535,912	+				+0.8
2,535,912	+				-0.8
2,535,913	-				+0.8
2,535,913	-				+0.5
2,535,913	-				-1.9
2,535,913	-				+0.9
2,535,913	-				+0.1
2,535,913	-				+0.7
2,535,913	-				+0.3
2,535,913	-				+0.7
2,535,933	+				-0.0
2,535,933	+				-0.7
2,535,933	+				+0.2
2,535,933	+				+1.2
2,535,933	+				-1.1
2,535,934	-				+0.8
2,535,934	-				+0.1
2,535,934	-				-0.1
2,535,934	-				+0.3
2,535,934	-				-0.0
2,535,934	-				-0.3
2,535,934	-				-0.2
2,535,934	-				+0.5
2,535,934	-				+0.9
2,536,051	+		ABZR87_RS11935	0.13	-0.1
2,536,052	-		ABZR87_RS11935	0.13	-0.2
2,536,052	-		ABZR87_RS11935	0.13	+0.7
2,536,111	+		ABZR87_RS11935	0.19	-0.6
2,536,111	+		ABZR87_RS11935	0.19	-1.2
2,536,111	+		ABZR87_RS11935	0.19	-0.2
2,536,111	+		ABZR87_RS11935	0.19	+0.7
2,536,111	+		ABZR87_RS11935	0.19	+1.1
2,536,111	+		ABZR87_RS11935	0.19	+0.6
2,536,161	+		ABZR87_RS11935	0.24	-0.0
2,536,161	+		ABZR87_RS11935	0.24	+0.7
2,536,161	+		ABZR87_RS11935	0.24	-2.2
2,536,161	+		ABZR87_RS11935	0.24	-0.2
2,536,162	-		ABZR87_RS11935	0.25	+2.2
2,536,162	-		ABZR87_RS11935	0.25	+0.5
2,536,162	-		ABZR87_RS11935	0.25	+0.4
2,536,204	+		ABZR87_RS11935	0.29	-0.9
2,536,205	-		ABZR87_RS11935	0.29	+0.5
2,536,205	-		ABZR87_RS11935	0.29	+0.3
2,536,205	-		ABZR87_RS11935	0.29	-0.1
2,536,237	+		ABZR87_RS11935	0.33	-0.5
2,536,237	+		ABZR87_RS11935	0.33	-0.4
2,536,238	-		ABZR87_RS11935	0.33	-0.8
2,536,238	-		ABZR87_RS11935	0.33	+0.3
2,536,411	+		ABZR87_RS11935	0.51	-0.2
2,536,471	-		ABZR87_RS11935	0.58	+0.5
2,536,732	+		ABZR87_RS11935	0.86	+1.4
2,536,732	+		ABZR87_RS11935	0.86	-0.2
2,536,732	+		ABZR87_RS11935	0.86	-0.0
2,536,732	+		ABZR87_RS11935	0.86	+0.7
2,536,732	+		ABZR87_RS11935	0.86	+0.1
2,536,732	+		ABZR87_RS11935	0.86	+0.5
2,536,732	+		ABZR87_RS11935	0.86	-0.3
2,536,733	-		ABZR87_RS11935	0.86	-0.8
2,536,733	-		ABZR87_RS11935	0.86	-0.0
2,536,733	-		ABZR87_RS11935	0.86	-1.2
2,536,733	-		ABZR87_RS11935	0.86	-0.2
2,536,733	-		ABZR87_RS11935	0.86	+0.6
2,536,859	-				-0.5
2,537,010	-		ABZR87_RS11940	0.29	-1.0
2,537,010	-		ABZR87_RS11940	0.29	-2.1
2,537,010	-		ABZR87_RS11940	0.29	+0.0
2,537,154	+		ABZR87_RS11940	0.61	-1.2
2,537,198	+		ABZR87_RS11940	0.71	+0.2
2,537,198	+		ABZR87_RS11940	0.71	+1.8
2,537,198	+		ABZR87_RS11940	0.71	-2.1
2,537,199	-		ABZR87_RS11940	0.71	-1.8
2,537,273	+		ABZR87_RS11940	0.87	-0.5
2,537,328	+				-1.6
2,537,328	+				+0.2
2,537,328	+				-0.6
2,537,328	+				-0.2
2,537,328	+				-0.0
2,537,328	+				-0.8
2,537,329	-				+0.5
2,537,329	-				-2.0
2,537,329	-				-0.2
2,537,329	-				+0.5
2,537,338	+				-1.5
2,537,339	-				+0.2
2,537,339	-				-0.2
2,537,383	+				-2.3
2,537,383	+				-1.6
2,537,398	-				-0.2
2,537,878	-				-0.3
2,537,878	-				-0.3
2,537,878	-				-0.4
2,538,056	-		ABZR87_RS11950	0.49	-0.0
2,538,241	+				+0.1
2,538,242	-				+0.2
2,538,242	-				+1.0
2,538,242	-				+0.7
2,538,248	+				-0.3
2,538,249	-				+0.4
2,538,254	+				-0.7
2,538,321	+		ABZR87_RS11955	0.13	+0.5
2,538,321	+		ABZR87_RS11955	0.13	+0.7
2,538,322	-		ABZR87_RS11955	0.13	+0.7
2,538,322	-		ABZR87_RS11955	0.13	+0.9
2,538,322	-		ABZR87_RS11955	0.13	+0.4
2,538,322	-		ABZR87_RS11955	0.13	+0.4
2,538,323	+		ABZR87_RS11955	0.13	-0.0
2,538,323	+		ABZR87_RS11955	0.13	+0.4
2,538,323	+		ABZR87_RS11955	0.13	-2.6
2,538,323	+		ABZR87_RS11955	0.13	-0.8
2,538,324	-		ABZR87_RS11955	0.13	+0.1
2,538,324	-		ABZR87_RS11955	0.13	+0.4