Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08955

Experiment: Ra1_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.01
1,900,219	+		ABZR87_RS08945	0.64	+1.9
1,900,219	+		ABZR87_RS08945	0.64	+2.3
1,900,219	+		ABZR87_RS08945	0.64	+2.1
1,900,220	-		ABZR87_RS08945	0.64	+1.9
1,900,274	+		ABZR87_RS08945	0.73	+2.1
1,900,275	-		ABZR87_RS08945	0.73	+1.6
1,900,275	-		ABZR87_RS08945	0.73	+2.3
1,900,306	+		ABZR87_RS08945	0.78	+2.8
1,900,306	+		ABZR87_RS08945	0.78	+2.2
1,900,306	+		ABZR87_RS08945	0.78	+0.9
1,900,307	-		ABZR87_RS08945	0.78	+2.1
1,900,307	-		ABZR87_RS08945	0.78	+2.8
1,900,307	-		ABZR87_RS08945	0.78	+1.2
1,900,307	-		ABZR87_RS08945	0.78	+0.9
1,900,307	-		ABZR87_RS08945	0.78	+2.7
1,900,307	-		ABZR87_RS08945	0.78	+2.6
1,900,307	-		ABZR87_RS08945	0.78	+2.2
1,900,331	-		ABZR87_RS08945	0.82	+1.5
1,900,341	+		ABZR87_RS08945	0.83	+1.9
1,900,341	+		ABZR87_RS08945	0.83	+2.3
1,900,341	+		ABZR87_RS08945	0.83	+2.1
1,900,341	+		ABZR87_RS08945	0.83	+1.0
1,900,342	-		ABZR87_RS08945	0.84	+1.6
1,900,515	+				+2.2
1,900,539	+				+2.3
1,900,539	+				+2.2
1,900,539	+				+3.0
1,900,540	-				-0.8
1,900,588	+				+2.0
1,900,589	-				+0.3
1,900,617	+				+1.6
1,900,617	+				+2.3
1,900,617	+				+0.6
1,900,617	+				+2.0
1,900,675	-		ABZR87_RS08950	0.13	+0.4
1,900,695	+		ABZR87_RS08950	0.18	+1.4
1,900,696	-		ABZR87_RS08950	0.18	-0.8
1,900,944	+		ABZR87_RS08950	0.73	+1.9
1,900,944	+		ABZR87_RS08950	0.73	+0.0
1,900,944	+		ABZR87_RS08950	0.73	+1.5
1,900,944	+		ABZR87_RS08950	0.73	+0.7
1,900,945	-		ABZR87_RS08950	0.73	-0.0
1,900,945	-		ABZR87_RS08950	0.73	+0.8
1,901,021	-				+0.1
1,901,021	-				-1.2
1,901,106	+				+2.3
1,901,106	+				+0.8
1,901,106	+				+0.4
1,901,162	+				+1.2
1,901,162	+				+0.5
1,901,162	+				+0.0
1,901,163	-				+0.2
1,901,163	-				-0.9
1,901,163	-				-1.6
1,901,163	-				+0.0
1,901,165	+				+1.8
1,901,165	+				+1.3
1,901,165	+				+0.6
1,901,165	+				-0.4
1,901,165	+				+0.8
1,901,165	+				+1.0
1,901,165	+				+0.3
1,901,165	+				+1.2
1,901,165	+				+0.8
1,901,166	-				-0.4
1,901,166	-				-0.4
1,901,166	-				-0.3
1,901,166	-				+0.9
1,901,166	-				-0.7
1,901,208	-				-0.8
1,902,729	+				+0.9
1,902,730	-				+0.8
1,902,730	-				+0.1
1,902,790	-				+0.5
1,902,790	-				+0.1
1,902,808	+				+0.5
1,902,857	+				-1.1
1,902,857	+				-0.4
1,902,857	+				+0.1
1,902,858	-				+0.8
1,902,858	-				-0.1
1,902,858	-				+0.0
1,902,858	-				+0.1
1,903,185	+		ABZR87_RS08960	0.44	+0.4
1,903,185	+		ABZR87_RS08960	0.44	-0.6
1,903,185	+		ABZR87_RS08960	0.44	+0.2
1,903,185	+		ABZR87_RS08960	0.44	+0.5
1,903,186	-		ABZR87_RS08960	0.45	-1.3
1,903,186	-		ABZR87_RS08960	0.45	-0.2
1,903,186	-		ABZR87_RS08960	0.45	+0.5
1,903,199	+		ABZR87_RS08960	0.46	-0.2
1,903,200	-		ABZR87_RS08960	0.46	-0.3
1,903,200	-		ABZR87_RS08960	0.46	+0.3
1,903,200	-		ABZR87_RS08960	0.46	-1.0
1,903,200	-		ABZR87_RS08960	0.46	-0.0
1,903,242	+		ABZR87_RS08960	0.52	-0.8
1,903,243	-		ABZR87_RS08960	0.52	-0.8
1,903,243	-		ABZR87_RS08960	0.52	+0.1
1,903,243	-		ABZR87_RS08960	0.52	-0.3
1,903,243	-		ABZR87_RS08960	0.52	-0.7
1,903,264	+		ABZR87_RS08960	0.55	-0.7
1,903,264	+		ABZR87_RS08960	0.55	-0.4
1,903,264	+		ABZR87_RS08960	0.55	+0.6
1,903,265	-		ABZR87_RS08960	0.55	-0.1
1,903,265	-		ABZR87_RS08960	0.55	-0.2
1,903,288	+		ABZR87_RS08960	0.58	-0.4
1,903,288	+		ABZR87_RS08960	0.58	-0.1
1,903,288	+		ABZR87_RS08960	0.58	-0.4
1,903,289	-		ABZR87_RS08960	0.58	+1.2
1,903,289	-		ABZR87_RS08960	0.58	+0.3
1,903,289	-		ABZR87_RS08960	0.58	-0.5
1,903,289	-		ABZR87_RS08960	0.58	+0.1
1,903,289	-		ABZR87_RS08960	0.58	+0.4
1,903,365	-		ABZR87_RS08960	0.68	+0.8