Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS00105

Experiment: Ra1_0.01

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.01
21,655	+				+1.3
21,655	+				+0.5
21,655	+				+0.5
21,656	-				-0.2
21,656	-				+0.8
21,656	-				-2.0
21,760	+				+1.0
21,760	+				-0.2
21,947	+				+1.2
21,947	+				-1.8
21,948	-				+1.8
22,013	-				+0.0
22,013	-				-0.2
22,117	+				+0.1
22,207	-				-0.2
22,570	-		ABZR87_RS00100	0.89	-0.9
22,570	-		ABZR87_RS00100	0.89	+0.8
22,603	+				+1.2
22,603	+				+0.5
22,603	+				-0.2
22,603	+				-1.2
22,603	+				+0.8
22,603	+				-0.9
22,603	+				-0.3
22,604	-				-0.0
22,604	-				-0.3
22,604	-				-0.8
22,604	-				-0.2
22,604	-				-0.4
22,604	-				+0.0
22,604	-				-0.8
22,604	-				+0.3
22,604	-				-0.5
22,604	-				-1.5
22,650	+		ABZR87_RS00105	0.13	-0.4
22,650	+		ABZR87_RS00105	0.13	-0.7
22,650	+		ABZR87_RS00105	0.13	-0.3
22,650	+		ABZR87_RS00105	0.13	-0.4
22,650	+		ABZR87_RS00105	0.13	-0.7
22,651	-		ABZR87_RS00105	0.14	-0.3
22,651	-		ABZR87_RS00105	0.14	-0.6
22,651	-		ABZR87_RS00105	0.14	-0.1
22,651	-		ABZR87_RS00105	0.14	-0.5
22,989	+				+0.2
22,989	+				+0.5
22,989	+				+0.7
22,990	-				-0.4
22,990	-				+0.1
22,990	-				+0.5
22,990	-				+0.3
22,990	-				-0.4
22,990	-				+0.4
22,990	-				-0.7
22,990	-				-0.1
22,991	+				-0.8
22,991	+				-0.5
22,992	-				+0.3
22,992	-				-0.2
23,031	+				-1.1
23,054	-				-0.5
23,170	-				-0.4
23,170	-				-0.5
23,185	+				-0.2
23,206	+				-1.3
23,240	-				+0.8
23,280	+				-0.7
23,280	+				+0.6
23,389	-				+0.1
23,408	-				+0.3
23,408	-				-0.5
23,465	+				+0.2
23,465	+				-1.3
23,465	+				+1.2
23,465	+				+0.2
23,465	+				+0.1
23,465	+				-0.9
23,465	+				-1.3
23,465	+				-0.6
23,466	-				-0.4
23,466	-				+0.1
23,466	-				-0.9
23,466	-				-0.0
23,466	-				+0.3
23,466	-				+0.3
23,466	-				+0.5
23,466	-				+0.2
23,466	-				+0.4
23,466	-				+0.7
23,526	+				-0.0
23,526	+				-0.2
23,526	+				+0.6
23,527	-				+0.0
23,527	-				-0.2
23,613	+		ABZR87_RS00115	0.21	+0.5
23,613	+		ABZR87_RS00115	0.21	-0.1
23,614	-		ABZR87_RS00115	0.21	+0.3
23,614	-		ABZR87_RS00115	0.21	-0.2
23,614	-		ABZR87_RS00115	0.21	-0.4
23,670	+		ABZR87_RS00115	0.33	+1.4
23,670	+		ABZR87_RS00115	0.33	-0.7
23,671	-		ABZR87_RS00115	0.33	-0.2
23,671	-		ABZR87_RS00115	0.33	-1.2
23,671	-		ABZR87_RS00115	0.33	+0.1
23,671	-		ABZR87_RS00115	0.33	-1.0
23,671	-		ABZR87_RS00115	0.33	-2.0
23,671	-		ABZR87_RS00115	0.33	-0.7
23,671	-		ABZR87_RS00115	0.33	-0.3
23,671	-		ABZR87_RS00115	0.33	-0.3
23,731	-		ABZR87_RS00115	0.46	+0.5
23,766	+		ABZR87_RS00115	0.54	-1.6
23,766	+		ABZR87_RS00115	0.54	-1.3
23,767	-		ABZR87_RS00115	0.54	-2.2
23,767	-		ABZR87_RS00115	0.54	-1.3
23,767	-		ABZR87_RS00115	0.54	-0.1
23,767	-		ABZR87_RS00115	0.54	-1.1
23,828	-		ABZR87_RS00115	0.67	+0.1