Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002079

Experiment: RCH2_defined_glucose_5mM with Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Sucrose 5 mM
2,326,755	-		ABIE53_002078	0.49	-1.0
2,326,755	-		ABIE53_002078	0.49	+0.9
2,326,755	-		ABIE53_002078	0.49	+1.3
2,326,890	+		ABIE53_002078	0.60	-1.3
2,326,890	+		ABIE53_002078	0.60	+0.9
2,326,890	+		ABIE53_002078	0.60	-1.0
2,326,890	+		ABIE53_002078	0.60	-0.2
2,326,890	+		ABIE53_002078	0.60	-1.2
2,326,891	-		ABIE53_002078	0.60	+0.8
2,326,912	+		ABIE53_002078	0.62	+1.6
2,326,912	+		ABIE53_002078	0.62	+1.2
2,326,912	+		ABIE53_002078	0.62	-0.7
2,326,912	+		ABIE53_002078	0.62	-0.4
2,326,912	+		ABIE53_002078	0.62	-0.7
2,326,913	-		ABIE53_002078	0.62	+0.1
2,326,913	-		ABIE53_002078	0.62	-0.4
2,326,913	-		ABIE53_002078	0.62	-1.0
2,326,939	-		ABIE53_002078	0.64	+2.4
2,327,300	+				+0.8
2,327,300	+				-1.9
2,327,300	+				+0.3
2,327,301	-				-1.1
2,327,361	+				+2.6
2,327,362	-				+0.9
2,327,379	-				+1.3
2,327,379	-				-1.0
2,327,396	+				-1.2
2,327,397	-				-0.5
2,327,397	-				-0.7
2,327,397	-				+1.1
2,327,410	+				+1.6
2,327,411	-				-1.9
2,327,411	-				+0.6
2,327,438	-				-0.9
2,327,438	-				-1.9
2,327,438	-				+0.6
2,327,515	+				+0.3
2,327,515	+				+0.5
2,327,515	+				-0.2
2,327,516	-				+0.0
2,327,516	-				-0.3
2,327,516	-				-0.2
2,327,591	+				+0.6
2,327,592	-				-0.1
2,327,592	-				+0.1
2,327,603	+				-0.6
2,327,603	+				+1.6
2,327,604	-				-1.0
2,327,604	-				+0.1
2,327,604	-				+0.5
2,327,604	-				+1.8
2,327,604	-				-0.1
2,327,604	-				+0.6
2,327,604	-				+0.6
2,327,604	-				-0.7
2,327,605	+				+0.2
2,327,605	+				+1.6
2,327,606	-				-1.6
2,327,606	-				-0.7
2,327,606	-				+0.9
2,327,674	+		ABIE53_002079	0.13	-0.2
2,327,755	+		ABIE53_002079	0.21	-1.2
2,327,755	+		ABIE53_002079	0.21	-0.4
2,327,755	+		ABIE53_002079	0.21	-0.1
2,327,755	+		ABIE53_002079	0.21	-2.5
2,327,755	+		ABIE53_002079	0.21	+2.2
2,327,755	+		ABIE53_002079	0.21	-1.7
2,327,755	+		ABIE53_002079	0.21	+2.0
2,327,755	+		ABIE53_002079	0.21	-1.4
2,327,755	+		ABIE53_002079	0.21	-0.4
2,327,755	+		ABIE53_002079	0.21	-2.2
2,327,756	-		ABIE53_002079	0.21	-0.7
2,327,756	-		ABIE53_002079	0.21	+0.7
2,327,756	-		ABIE53_002079	0.21	-1.6
2,327,756	-		ABIE53_002079	0.21	-1.4
2,327,756	-		ABIE53_002079	0.21	+0.7
2,327,756	-		ABIE53_002079	0.21	-1.6
2,327,756	-		ABIE53_002079	0.21	-0.9
2,327,818	-		ABIE53_002079	0.27	-0.4
2,327,858	-		ABIE53_002079	0.31	-2.7
2,327,872	+		ABIE53_002079	0.33	-0.4
2,327,873	-		ABIE53_002079	0.33	+0.0
2,327,873	-		ABIE53_002079	0.33	-3.1
2,327,873	-		ABIE53_002079	0.33	-1.1
2,327,908	+		ABIE53_002079	0.36	+0.0
2,327,908	+		ABIE53_002079	0.36	+0.8
2,327,909	-		ABIE53_002079	0.36	-0.4
2,327,909	-		ABIE53_002079	0.36	+0.0
2,328,176	-		ABIE53_002079	0.63	+2.0
2,328,321	+		ABIE53_002079	0.77	+0.4
2,328,321	+		ABIE53_002079	0.77	-0.3
2,328,322	-		ABIE53_002079	0.77	-0.3
2,328,322	-		ABIE53_002079	0.77	+0.6
2,328,336	+		ABIE53_002079	0.79	-1.1
2,328,580	+				+0.2
2,328,580	+				+0.0
2,328,580	+				-0.7
2,328,580	+				+0.2
2,328,580	+				+1.2
2,328,580	+				+0.1
2,328,580	+				-0.3
2,328,581	-				+1.0
2,328,582	+				+1.6
2,328,582	+				-0.1
2,328,582	+				+1.6
2,328,582	+				+1.6
2,328,582	+				+0.8
2,328,583	-				+0.0
2,328,583	-				+2.6
2,328,688	+				-0.7
2,328,689	-				+0.2
2,328,689	-				-1.6
2,328,689	-				+2.1
2,328,689	-				+0.3
2,328,689	-				+0.6
2,328,689	-				+0.3
2,328,724	+				+0.5
2,328,724	+				-0.7
2,328,724	+				-0.2
2,328,725	-				-2.0
2,328,841	+				-0.0
2,328,899	+		ABIE53_002080	0.12	-0.0
2,328,900	-		ABIE53_002080	0.12	+0.6
2,328,900	-		ABIE53_002080	0.12	+0.9
2,328,955	+		ABIE53_002080	0.14	-1.4
2,328,956	-		ABIE53_002080	0.14	-2.2
2,329,105	+		ABIE53_002080	0.19	-0.4
2,329,105	+		ABIE53_002080	0.19	-1.4
2,329,106	-		ABIE53_002080	0.19	-1.4
2,329,191	+		ABIE53_002080	0.22	-0.1
2,329,191	+		ABIE53_002080	0.22	+0.2
2,329,319	+		ABIE53_002080	0.27	+0.4
2,329,319	+		ABIE53_002080	0.27	-0.6
2,329,319	+		ABIE53_002080	0.27	-0.4
2,329,320	-		ABIE53_002080	0.27	-0.4
2,329,320	-		ABIE53_002080	0.27	+0.6
2,329,320	-		ABIE53_002080	0.27	-1.0
2,329,320	-		ABIE53_002080	0.27	+0.8
2,329,411	+		ABIE53_002080	0.30	+0.6
2,329,412	-		ABIE53_002080	0.30	-0.3
2,329,433	-		ABIE53_002080	0.31	-0.0