Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001630

Experiment: RCH2_defined_glucose_5mM with Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Sucrose 5 mM
1,816,738	+				-1.4
1,816,738	+				+0.4
1,816,738	+				+2.2
1,816,770	+				-0.3
1,816,770	+				+0.3
1,816,771	-				-1.4
1,816,790	+				-1.2
1,816,790	+				-0.1
1,816,790	+				+0.3
1,817,063	+		ABIE53_001630	0.25	-1.2
1,817,063	+		ABIE53_001630	0.25	+1.5
1,817,064	-		ABIE53_001630	0.26	-1.0
1,817,064	-		ABIE53_001630	0.26	-1.7
1,817,118	-		ABIE53_001630	0.53	-0.0
1,817,220	-				-2.5
1,817,286	-				+0.0
1,817,306	-		ABIE53_001631	0.11	-1.7
1,817,332	+		ABIE53_001631	0.14	-0.1
1,817,333	-		ABIE53_001631	0.14	-0.2
1,817,333	-		ABIE53_001631	0.14	+0.0
1,817,333	-		ABIE53_001631	0.14	-3.0
1,817,333	-		ABIE53_001631	0.14	-0.7
1,817,392	+		ABIE53_001631	0.23	-0.5
1,817,393	-		ABIE53_001631	0.23	-0.4
1,817,393	-		ABIE53_001631	0.23	-0.7
1,817,416	+		ABIE53_001631	0.26	-0.4
1,817,417	-		ABIE53_001631	0.26	+1.6
1,817,495	+		ABIE53_001631	0.37	+1.3
1,817,495	+		ABIE53_001631	0.37	-1.5
1,817,496	-		ABIE53_001631	0.38	-2.0
1,817,496	-		ABIE53_001631	0.38	+0.6
1,817,496	-		ABIE53_001631	0.38	-0.9
1,817,496	-		ABIE53_001631	0.38	-0.4
1,817,627	-		ABIE53_001631	0.56	-0.3
1,817,827	+		ABIE53_001631	0.85	+1.6
1,817,827	+		ABIE53_001631	0.85	-0.3
1,817,827	+		ABIE53_001631	0.85	+1.6
1,817,827	+		ABIE53_001631	0.85	-0.8
1,817,828	-		ABIE53_001631	0.85	-0.0
1,817,828	-		ABIE53_001631	0.85	-0.7
1,817,828	-		ABIE53_001631	0.85	+0.6
1,817,828	-		ABIE53_001631	0.85	-0.5
1,817,828	-		ABIE53_001631	0.85	-0.6
1,817,998	+				+1.0
1,817,998	+				-0.6
1,817,999	-				+1.0
1,817,999	-				+0.6
1,817,999	-				+1.0
1,818,031	+				-0.5
1,818,032	-				+0.9
1,818,032	-				+0.4
1,818,032	-				+0.2
1,818,032	-				-1.7
1,818,032	-				-0.3
1,818,032	-				+1.1
1,818,032	-				+1.6
1,818,062	+				-1.4
1,818,062	+				-1.2