Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28545

Experiment: Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Ammonium chloride (N); with MOPS; with PEG
6,350,922	-		PFLU_RS28540	0.66	+0.0
6,350,922	-		PFLU_RS28540	0.66	+0.2
6,351,065	+		PFLU_RS28540	0.71	+0.2
6,351,065	+		PFLU_RS28540	0.71	+0.9
6,351,065	+		PFLU_RS28540	0.71	-0.2
6,351,066	-		PFLU_RS28540	0.72	+1.5
6,351,066	-		PFLU_RS28540	0.72	+0.7
6,351,066	-		PFLU_RS28540	0.72	-1.6
6,351,066	-		PFLU_RS28540	0.72	-0.2
6,351,066	-		PFLU_RS28540	0.72	+0.3
6,351,066	-		PFLU_RS28540	0.72	+0.9
6,351,066	-		PFLU_RS28540	0.72	-0.2
6,351,066	-		PFLU_RS28540	0.72	+0.3
6,351,066	-		PFLU_RS28540	0.72	-0.6
6,351,089	+		PFLU_RS28540	0.72	+0.9
6,351,089	+		PFLU_RS28540	0.72	-0.1
6,351,089	+		PFLU_RS28540	0.72	+0.2
6,351,089	+		PFLU_RS28540	0.72	+1.3
6,351,089	+		PFLU_RS28540	0.72	-0.9
6,351,089	+		PFLU_RS28540	0.72	+0.5
6,351,090	-		PFLU_RS28540	0.73	-0.4
6,351,090	-		PFLU_RS28540	0.73	+1.9
6,351,090	-		PFLU_RS28540	0.73	-0.9
6,351,090	-		PFLU_RS28540	0.73	-0.7
6,351,090	-		PFLU_RS28540	0.73	-0.2
6,351,090	-		PFLU_RS28540	0.73	+0.4
6,351,090	-		PFLU_RS28540	0.73	-0.4
6,351,090	-		PFLU_RS28540	0.73	-0.3
6,351,090	-		PFLU_RS28540	0.73	+1.4
6,351,090	-		PFLU_RS28540	0.73	-0.8
6,351,104	+		PFLU_RS28540	0.73	+0.2
6,351,104	+		PFLU_RS28540	0.73	-0.2
6,351,104	+		PFLU_RS28540	0.73	+0.4
6,351,104	+		PFLU_RS28540	0.73	-0.3
6,351,104	+		PFLU_RS28540	0.73	+0.7
6,351,104	+		PFLU_RS28540	0.73	+0.1
6,351,105	-		PFLU_RS28540	0.73	+0.6
6,351,105	-		PFLU_RS28540	0.73	-1.1
6,351,105	-		PFLU_RS28540	0.73	-0.1
6,351,112	-		PFLU_RS28540	0.73	+0.2
6,351,134	+		PFLU_RS28540	0.74	-1.1
6,351,134	+		PFLU_RS28540	0.74	+0.0
6,351,134	+		PFLU_RS28540	0.74	-0.6
6,351,134	+		PFLU_RS28540	0.74	+1.0
6,351,135	-		PFLU_RS28540	0.74	-0.1
6,351,135	-		PFLU_RS28540	0.74	+1.4
6,351,135	-		PFLU_RS28540	0.74	+1.9
6,351,135	-		PFLU_RS28540	0.74	-1.6
6,351,135	-		PFLU_RS28540	0.74	-1.2
6,351,347	+		PFLU_RS28540	0.83	-1.0
6,351,347	+		PFLU_RS28540	0.83	+0.3
6,351,347	+		PFLU_RS28540	0.83	+0.2
6,351,348	-		PFLU_RS28540	0.83	+2.2
6,351,348	-		PFLU_RS28540	0.83	+0.4
6,351,348	-		PFLU_RS28540	0.83	-0.0
6,351,348	-		PFLU_RS28540	0.83	+0.6
6,351,465	+		PFLU_RS28540	0.88	+2.9
6,351,465	+		PFLU_RS28540	0.88	-1.0
6,351,465	+		PFLU_RS28540	0.88	-0.3
6,351,465	+		PFLU_RS28540	0.88	-0.1
6,351,465	+		PFLU_RS28540	0.88	+0.6
6,351,465	+		PFLU_RS28540	0.88	-0.3
6,351,465	+		PFLU_RS28540	0.88	+0.7
6,351,465	+		PFLU_RS28540	0.88	-1.0
6,351,465	+		PFLU_RS28540	0.88	-0.0
6,351,466	-		PFLU_RS28540	0.88	+1.9
6,351,466	-		PFLU_RS28540	0.88	-0.2
6,351,466	-		PFLU_RS28540	0.88	-0.8
6,351,466	-		PFLU_RS28540	0.88	-0.2
6,351,466	-		PFLU_RS28540	0.88	+0.3
6,351,642	+				-1.0
6,351,642	+				-0.6
6,351,654	-				-1.0
6,351,654	-				-0.9
6,351,689	+				+0.2
6,351,690	-				+0.7
6,351,690	-				-0.0
6,351,690	-				-0.4
6,351,807	+				+1.5
6,351,807	+				+0.1
6,351,807	+				-0.0
6,351,807	+				+0.1
6,351,808	-				-0.9
6,351,808	-				-0.8
6,351,808	-				-1.5
6,351,808	-				-0.9
6,351,821	+				-1.0
6,351,821	+				+0.1
6,351,822	-				-1.3
6,351,822	-				-1.9
6,351,822	-				-1.6
6,351,822	-				-0.6
6,351,824	+				+0.3
6,351,824	+				-1.1
6,351,824	+				+0.5
6,351,828	+				+1.2
6,351,828	+				-0.6
6,351,829	-				-0.6
6,351,829	-				-0.2
6,351,829	-				-0.6
6,351,829	-				-0.6
6,351,829	-				-0.1
6,351,924	+				-2.8
6,351,925	-				+0.9
6,351,925	-				-1.4
6,351,925	-				-0.8
6,351,925	-				-3.1
6,351,928	+				-1.4
6,351,937	+				-1.6
6,351,937	+				-2.2
6,351,937	+				-0.3
6,351,937	+				-0.9
6,351,937	+				-2.0
6,351,937	+				-0.8
6,351,938	-				-1.9
6,351,938	-				-1.6
6,351,938	-				-1.7
6,351,964	+				-0.9
6,351,964	+				+0.3
6,351,964	+				-1.6
6,351,964	+				+0.1
6,351,964	+				-2.4
6,351,964	+				-1.9
6,351,965	-				-2.7
6,351,965	-				-2.0
6,352,192	+		PFLU_RS28545	0.31	-2.6
6,352,192	+		PFLU_RS28545	0.31	-3.1
6,352,193	-		PFLU_RS28545	0.32	-0.7
6,352,193	-		PFLU_RS28545	0.32	-1.1
6,352,193	-		PFLU_RS28545	0.32	-2.0
6,352,219	+		PFLU_RS28545	0.34	-2.1
6,352,220	-		PFLU_RS28545	0.34	-3.0
6,352,220	-		PFLU_RS28545	0.34	-2.1
6,352,220	-		PFLU_RS28545	0.34	-2.7
6,352,229	+		PFLU_RS28545	0.35	-0.3
6,352,256	+		PFLU_RS28545	0.38	-3.5
6,352,256	+		PFLU_RS28545	0.38	+0.4
6,352,257	-		PFLU_RS28545	0.38	-0.4
6,352,350	+		PFLU_RS28545	0.48	-1.4
6,352,350	+		PFLU_RS28545	0.48	-2.0
6,352,350	+		PFLU_RS28545	0.48	-2.8
6,352,350	+		PFLU_RS28545	0.48	-1.1
6,352,350	+		PFLU_RS28545	0.48	-1.7
6,352,350	+		PFLU_RS28545	0.48	-2.3
6,352,351	-		PFLU_RS28545	0.48	-3.1
6,352,351	-		PFLU_RS28545	0.48	-2.7
6,352,351	-		PFLU_RS28545	0.48	-1.2
6,352,522	+		PFLU_RS28545	0.66	-3.4
6,352,522	+		PFLU_RS28545	0.66	-0.4
6,352,522	+		PFLU_RS28545	0.66	-2.3
6,352,522	+		PFLU_RS28545	0.66	-2.3
6,352,523	-		PFLU_RS28545	0.66	-2.6
6,352,668	+		PFLU_RS28545	0.82	-1.7
6,352,668	+		PFLU_RS28545	0.82	-2.3
6,352,668	+		PFLU_RS28545	0.82	-2.0
6,352,668	+		PFLU_RS28545	0.82	-0.1
6,352,668	+		PFLU_RS28545	0.82	+0.9
6,352,669	-		PFLU_RS28545	0.82	+0.3
6,352,669	-		PFLU_RS28545	0.82	-1.2
6,352,669	-		PFLU_RS28545	0.82	+1.0
6,352,764	+				-2.8
6,352,764	+				-2.3
6,352,764	+				-0.8
6,352,764	+				-2.7
6,352,764	+				-2.3
6,352,764	+				-1.1
6,352,764	+				-0.4
6,352,765	-				-2.3
6,352,765	-				-2.2
6,352,765	-				-0.6
6,352,765	-				-2.0
6,352,789	+				-0.4
6,352,789	+				-1.7
6,352,812	+				+1.0
6,352,812	+				-1.5
6,352,812	+				-1.0
6,352,812	+				-0.1
6,352,813	-				-0.9
6,352,813	-				-1.1
6,352,884	+				+0.1
6,352,884	+				+1.1
6,352,884	+				-1.8
6,352,884	+				+0.0
6,352,884	+				+0.4
6,352,884	+				+0.4
6,352,884	+				-1.2
6,352,884	+				+1.2
6,352,884	+				+0.8
6,352,884	+				+0.6
6,352,884	+				-0.7
6,352,884	+				+0.1
6,352,884	+				-1.7
6,352,884	+				-0.3
6,352,884	+				+0.1
6,352,884	+				+0.1
6,352,885	-				+0.8
6,352,885	-				-0.3
6,352,885	-				+0.5
6,352,885	-				-0.2
6,352,885	-				-0.5
6,352,885	-				+0.4
6,352,885	-				-0.8
6,352,885	-				-1.0
6,352,885	-				-0.4
6,352,921	-		PFLU_RS28550	0.16	+2.9
6,352,921	-		PFLU_RS28550	0.16	-0.7
6,352,921	-		PFLU_RS28550	0.16	-0.5
6,352,921	-		PFLU_RS28550	0.16	+0.4
6,352,921	-		PFLU_RS28550	0.16	+0.7
6,352,989	+		PFLU_RS28550	0.28	-1.2
6,352,989	+		PFLU_RS28550	0.28	+0.0
6,352,989	+		PFLU_RS28550	0.28	-0.6
6,352,989	+		PFLU_RS28550	0.28	+0.7
6,352,989	+		PFLU_RS28550	0.28	-0.1
6,352,989	+		PFLU_RS28550	0.28	-0.2
6,352,989	+		PFLU_RS28550	0.28	+0.5
6,352,989	+		PFLU_RS28550	0.28	-1.0
6,352,989	+		PFLU_RS28550	0.28	-0.1
6,352,990	-		PFLU_RS28550	0.28	-1.8
6,352,990	-		PFLU_RS28550	0.28	-1.0
6,352,990	-		PFLU_RS28550	0.28	-1.0
6,352,990	-		PFLU_RS28550	0.28	+0.0
6,352,990	-		PFLU_RS28550	0.28	-1.6
6,352,990	-		PFLU_RS28550	0.28	+1.3
6,352,990	-		PFLU_RS28550	0.28	-0.2
6,352,990	-		PFLU_RS28550	0.28	-1.1
6,352,990	-		PFLU_RS28550	0.28	+0.7
6,352,990	-		PFLU_RS28550	0.28	-0.1
6,352,990	-		PFLU_RS28550	0.28	+0.3
6,352,990	-		PFLU_RS28550	0.28	+1.5
6,352,990	-		PFLU_RS28550	0.28	+0.1
6,353,061	+		PFLU_RS28550	0.42	+0.4
6,353,062	-		PFLU_RS28550	0.42	-0.1
6,353,176	+		PFLU_RS28550	0.63	-0.1
6,353,177	-		PFLU_RS28550	0.63	+0.1
6,353,377	+				+0.8
6,353,377	+				-0.4
6,353,378	-				+1.6
6,353,378	-				+0.5
6,353,378	-				-0.3
6,353,378	-				-1.0
6,353,378	-				+0.2
6,353,378	-				-0.3
6,353,378	-				+0.5
6,353,378	-				-1.4
6,353,378	-				-0.3
6,353,378	-				+0.0
6,353,378	-				+0.8
6,353,416	+				+0.6
6,353,447	-				-0.8
6,353,450	+				-1.8
6,353,450	+				-0.9
6,353,450	+				-0.1
6,353,450	+				-0.5
6,353,450	+				+0.4
6,353,450	+				+2.6
6,353,451	-				+0.4
6,353,451	-				+0.7
6,353,451	-				-0.3
6,353,451	-				-0.7
6,353,455	+				-0.3
6,353,456	-				-1.8
6,353,456	-				+2.0
6,353,483	+				-1.1
6,353,483	+				+1.2
6,353,483	+				+0.5
6,353,483	+				+0.9
6,353,483	+				-0.3
6,353,483	+				+0.1
6,353,483	+				-0.9
6,353,483	+				+0.5
6,353,483	+				-0.6
6,353,483	+				-0.3
6,353,483	+				+0.5
6,353,483	+				-0.8
6,353,483	+				-0.3
6,353,484	-				+0.9
6,353,484	-				-3.2
6,353,484	-				+0.6
6,353,484	-				+0.6
6,353,484	-				+0.1
6,353,484	-				+0.9
6,353,484	-				-0.6
6,353,484	-				+0.4
6,353,484	-				-0.9
6,353,484	-				-1.7
6,353,484	-				-1.3
6,353,487	+				-1.1
6,353,487	+				-1.1
6,353,488	-				+1.0
6,353,586	+				+0.0
6,353,700	+		PFLU_RS28555	0.11	-0.1
6,353,700	+		PFLU_RS28555	0.11	+1.2
6,353,700	+		PFLU_RS28555	0.11	-0.3
6,353,700	+		PFLU_RS28555	0.11	+1.2
6,353,700	+		PFLU_RS28555	0.11	-0.9
6,353,700	+		PFLU_RS28555	0.11	-0.2
6,353,700	+		PFLU_RS28555	0.11	+0.3
6,353,700	+		PFLU_RS28555	0.11	-0.4
6,353,700	+		PFLU_RS28555	0.11	-1.0
6,353,700	+		PFLU_RS28555	0.11	+0.7
6,353,700	+		PFLU_RS28555	0.11	+0.3
6,353,700	+		PFLU_RS28555	0.11	+0.9
6,353,700	+		PFLU_RS28555	0.11	+0.9
6,353,700	+		PFLU_RS28555	0.11	-0.6
6,353,700	+		PFLU_RS28555	0.11	-0.3
6,353,700	+		PFLU_RS28555	0.11	+1.0
6,353,700	+		PFLU_RS28555	0.11	+0.4
6,353,700	+		PFLU_RS28555	0.11	+1.0
6,353,700	+		PFLU_RS28555	0.11	-0.2
6,353,700	+		PFLU_RS28555	0.11	-0.8
6,353,700	+		PFLU_RS28555	0.11	+0.2
6,353,700	+		PFLU_RS28555	0.11	+0.0
6,353,701	-		PFLU_RS28555	0.11	+0.0
6,353,701	-		PFLU_RS28555	0.11	+1.9
6,353,701	-		PFLU_RS28555	0.11	-0.9
6,353,701	-		PFLU_RS28555	0.11	+0.5
6,353,701	-		PFLU_RS28555	0.11	+1.6
6,353,701	-		PFLU_RS28555	0.11	+0.0
6,353,701	-		PFLU_RS28555	0.11	-1.2
6,353,701	-		PFLU_RS28555	0.11	-0.0
6,353,701	-		PFLU_RS28555	0.11	+0.5
6,353,701	-		PFLU_RS28555	0.11	-0.0
6,353,701	-		PFLU_RS28555	0.11	-0.4
6,353,701	-		PFLU_RS28555	0.11	+1.2
6,353,701	-		PFLU_RS28555	0.11	+0.3
6,353,701	-		PFLU_RS28555	0.11	+0.0
6,353,701	-		PFLU_RS28555	0.11	+0.3
6,353,701	-		PFLU_RS28555	0.11	+0.3
6,353,701	-		PFLU_RS28555	0.11	-0.7
6,353,701	-		PFLU_RS28555	0.11	+2.4
6,353,701	-		PFLU_RS28555	0.11	-0.5
6,353,701	-		PFLU_RS28555	0.11	+0.4
6,353,701	-		PFLU_RS28555	0.11	+1.9
6,353,701	-		PFLU_RS28555	0.11	+0.4
6,353,701	-		PFLU_RS28555	0.11	+0.2
6,353,710	+		PFLU_RS28555	0.12	+0.9
6,353,710	+		PFLU_RS28555	0.12	-0.5
6,353,710	+		PFLU_RS28555	0.12	-0.6
6,353,769	+		PFLU_RS28555	0.17	-0.7
6,353,769	+		PFLU_RS28555	0.17	+0.1
6,353,769	+		PFLU_RS28555	0.17	-1.3
6,353,769	+		PFLU_RS28555	0.17	+0.5
6,353,769	+		PFLU_RS28555	0.17	-0.2
6,353,769	+		PFLU_RS28555	0.17	+0.3
6,353,769	+		PFLU_RS28555	0.17	-0.2
6,353,769	+		PFLU_RS28555	0.17	-1.5
6,353,769	+		PFLU_RS28555	0.17	-0.5
6,353,769	+		PFLU_RS28555	0.17	-0.9
6,353,770	-		PFLU_RS28555	0.17	+0.3
6,353,770	-		PFLU_RS28555	0.17	-0.0
6,353,770	-		PFLU_RS28555	0.17	-0.2
6,353,770	-		PFLU_RS28555	0.17	-1.5
6,353,770	-		PFLU_RS28555	0.17	-1.2
6,353,770	-		PFLU_RS28555	0.17	+0.5
6,353,770	-		PFLU_RS28555	0.17	-1.5
6,353,829	+		PFLU_RS28555	0.23	+0.7
6,353,829	+		PFLU_RS28555	0.23	-1.6
6,353,829	+		PFLU_RS28555	0.23	+0.6
6,353,829	+		PFLU_RS28555	0.23	-0.6
6,353,829	+		PFLU_RS28555	0.23	+0.4
6,353,829	+		PFLU_RS28555	0.23	+0.4
6,353,829	+		PFLU_RS28555	0.23	-0.4
6,353,829	+		PFLU_RS28555	0.23	+0.2
6,353,829	+		PFLU_RS28555	0.23	-0.1
6,353,829	+		PFLU_RS28555	0.23	+0.7
6,353,829	+		PFLU_RS28555	0.23	-0.0
6,353,829	+		PFLU_RS28555	0.23	+1.3
6,353,829	+		PFLU_RS28555	0.23	+0.8
6,353,829	+		PFLU_RS28555	0.23	-0.2
6,353,829	+		PFLU_RS28555	0.23	-0.3
6,353,830	-		PFLU_RS28555	0.23	-0.9
6,353,830	-		PFLU_RS28555	0.23	-1.2
6,353,830	-		PFLU_RS28555	0.23	+1.5
6,353,830	-		PFLU_RS28555	0.23	-0.6
6,353,830	-		PFLU_RS28555	0.23	+0.6
6,353,830	-		PFLU_RS28555	0.23	-0.0
6,353,830	-		PFLU_RS28555	0.23	+0.7
6,353,830	-		PFLU_RS28555	0.23	+0.2
6,353,830	-		PFLU_RS28555	0.23	-0.4
6,353,830	-		PFLU_RS28555	0.23	+0.5
6,353,830	-		PFLU_RS28555	0.23	+0.1