Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22425

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
1,388,490	-		ABZR87_RS22415	0.32	-1.1
1,388,490	-		ABZR87_RS22415	0.32	+1.6
1,388,490	-		ABZR87_RS22415	0.32	-1.0
1,388,772	+				-0.1
1,388,773	-				-0.6
1,388,773	-				+1.0
1,388,773	-				-0.2
1,388,773	-				-0.6
1,388,773	-				-0.7
1,388,831	-				+0.3
1,388,833	+				+0.2
1,388,868	+				-0.8
1,388,868	+				+0.4
1,388,868	+				+0.7
1,388,868	+				+0.4
1,388,868	+				+2.0
1,388,868	+				+1.0
1,388,868	+				+0.7
1,388,869	-				+1.0
1,388,869	-				-0.0
1,388,869	-				-0.7
1,388,869	-				+0.3
1,388,869	-				-2.0
1,388,869	-				+0.2
1,388,869	-				-0.0
1,388,869	-				+0.2
1,388,869	-				+0.8
1,388,869	-				-1.0
1,388,869	-				-0.3
1,388,869	-				+0.2
1,389,138	+		ABZR87_RS22420	0.49	+1.0
1,389,138	+		ABZR87_RS22420	0.49	-0.8
1,389,139	-		ABZR87_RS22420	0.49	-0.3
1,389,139	-		ABZR87_RS22420	0.49	+0.3
1,389,618	+		ABZR87_RS22425	0.19	+0.6
1,389,619	-		ABZR87_RS22425	0.20	-0.6
1,389,677	+		ABZR87_RS22425	0.25	-0.4
1,389,677	+		ABZR87_RS22425	0.25	-1.2
1,389,677	+		ABZR87_RS22425	0.25	+1.3
1,389,677	+		ABZR87_RS22425	0.25	-0.0
1,389,677	+		ABZR87_RS22425	0.25	-0.6
1,389,677	+		ABZR87_RS22425	0.25	-1.1
1,389,677	+		ABZR87_RS22425	0.25	+0.1
1,389,677	+		ABZR87_RS22425	0.25	-1.6
1,389,678	-		ABZR87_RS22425	0.25	+1.2
1,389,678	-		ABZR87_RS22425	0.25	+0.0
1,389,678	-		ABZR87_RS22425	0.25	+0.0
1,389,678	-		ABZR87_RS22425	0.25	-0.6
1,389,678	-		ABZR87_RS22425	0.25	-0.2
1,389,678	-		ABZR87_RS22425	0.25	+0.1
1,389,678	-		ABZR87_RS22425	0.25	-0.4
1,389,678	-		ABZR87_RS22425	0.25	+0.0
1,389,723	+		ABZR87_RS22425	0.30	-0.5
1,389,724	-		ABZR87_RS22425	0.30	+0.9
1,389,724	-		ABZR87_RS22425	0.30	-0.5
1,389,724	-		ABZR87_RS22425	0.30	-1.1
1,389,724	-		ABZR87_RS22425	0.30	-0.1
1,389,724	-		ABZR87_RS22425	0.30	+0.2
1,389,789	+		ABZR87_RS22425	0.36	+0.7
1,389,790	-		ABZR87_RS22425	0.37	+0.6
1,389,790	-		ABZR87_RS22425	0.37	-0.1
1,389,790	-		ABZR87_RS22425	0.37	+0.9
1,389,790	-		ABZR87_RS22425	0.37	-0.3
1,389,790	-		ABZR87_RS22425	0.37	+0.5
1,389,790	-		ABZR87_RS22425	0.37	-0.0
1,390,029	+		ABZR87_RS22425	0.60	-0.5
1,390,029	+		ABZR87_RS22425	0.60	+1.2
1,390,029	+		ABZR87_RS22425	0.60	+0.5
1,390,029	+		ABZR87_RS22425	0.60	+0.7
1,390,029	+		ABZR87_RS22425	0.60	+1.0
1,390,030	-		ABZR87_RS22425	0.60	-1.3
1,390,030	-		ABZR87_RS22425	0.60	-0.7
1,390,030	-		ABZR87_RS22425	0.60	+0.5
1,390,030	-		ABZR87_RS22425	0.60	-0.3
1,390,030	-		ABZR87_RS22425	0.60	+0.1
1,390,080	+		ABZR87_RS22425	0.65	+0.3
1,390,081	-		ABZR87_RS22425	0.65	+0.6
1,390,081	-		ABZR87_RS22425	0.65	+0.0
1,390,081	-		ABZR87_RS22425	0.65	+0.9
1,390,122	+		ABZR87_RS22425	0.70	-0.5
1,390,123	-		ABZR87_RS22425	0.70	+0.3
1,390,123	-		ABZR87_RS22425	0.70	+0.4
1,390,155	+		ABZR87_RS22425	0.73	-0.2
1,390,156	-		ABZR87_RS22425	0.73	-1.5
1,390,156	-		ABZR87_RS22425	0.73	+0.7
1,390,156	-		ABZR87_RS22425	0.73	-0.9
1,390,156	-		ABZR87_RS22425	0.73	+0.5
1,390,156	-		ABZR87_RS22425	0.73	-0.2
1,390,425	+				-1.3
1,390,426	-				-1.4
1,390,426	-				-0.4
1,390,426	-				-0.6
1,390,432	+				-0.2
1,390,432	+				+1.0
1,390,433	-				+0.3
1,390,433	-				-0.0
1,390,433	-				-0.0
1,390,433	-				-1.5
1,390,771	+		ABZR87_RS22430	0.63	-0.2
1,390,771	+		ABZR87_RS22430	0.63	-0.8
1,390,771	+		ABZR87_RS22430	0.63	-0.1
1,390,771	+		ABZR87_RS22430	0.63	+0.2
1,390,772	-		ABZR87_RS22430	0.64	+1.2
1,390,772	-		ABZR87_RS22430	0.64	+0.9
1,390,876	+		ABZR87_RS22430	0.83	-1.8
1,390,876	+		ABZR87_RS22430	0.83	+1.7
1,390,877	-		ABZR87_RS22430	0.83	-2.6
1,390,877	-		ABZR87_RS22430	0.83	+0.2
1,390,877	-		ABZR87_RS22430	0.83	-0.9
1,390,913	-		ABZR87_RS22430	0.90	-0.7
1,390,967	+				-0.6
1,390,967	+				-1.9
1,390,967	+				-0.3
1,390,967	+				-0.1
1,390,967	+				+0.0
1,390,967	+				-0.2
1,390,968	-				-0.4
1,390,968	-				+1.0
1,390,968	-				+0.4
1,390,968	-				-0.8
1,390,968	-				+0.0
1,390,968	-				+0.4
1,390,998	+				-0.5
1,390,998	+				-0.3
1,390,998	+				-1.3
1,390,998	+				+0.0
1,390,998	+				-0.5
1,390,999	-				+0.5
1,390,999	-				-0.7
1,390,999	-				+1.4
1,390,999	-				-0.4
1,390,999	-				-1.5
1,390,999	-				+0.6
1,390,999	-				+1.2
1,390,999	-				-1.5
1,391,022	-				+0.0
1,391,115	+				-0.3
1,391,115	+				+0.3
1,391,254	+		ABZR87_RS22435	0.12	-0.7
1,391,254	+		ABZR87_RS22435	0.12	+0.0
1,391,254	+		ABZR87_RS22435	0.12	+0.3
1,391,255	-		ABZR87_RS22435	0.12	-0.6
1,391,255	-		ABZR87_RS22435	0.12	+1.0
1,391,257	+		ABZR87_RS22435	0.12	+1.4
1,391,258	-		ABZR87_RS22435	0.12	+0.2