Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22280

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
1,358,438	+		ABZR87_RS22275	0.28	-3.2
1,358,463	-		ABZR87_RS22275	0.30	-2.2
1,358,511	-		ABZR87_RS22275	0.34	-1.2
1,358,666	+		ABZR87_RS22275	0.46	-2.4
1,358,666	+		ABZR87_RS22275	0.46	-0.1
1,358,667	-		ABZR87_RS22275	0.47	-0.7
1,358,667	-		ABZR87_RS22275	0.47	-2.2
1,358,667	-		ABZR87_RS22275	0.47	-0.4
1,358,667	-		ABZR87_RS22275	0.47	-2.1
1,358,667	-		ABZR87_RS22275	0.47	-2.6
1,358,667	-		ABZR87_RS22275	0.47	-0.7
1,358,667	-		ABZR87_RS22275	0.47	-1.9
1,358,667	-		ABZR87_RS22275	0.47	-3.1
1,358,696	+		ABZR87_RS22275	0.49	-1.3
1,358,696	+		ABZR87_RS22275	0.49	-3.6
1,358,697	-		ABZR87_RS22275	0.49	-0.5
1,358,697	-		ABZR87_RS22275	0.49	-0.9
1,358,697	-		ABZR87_RS22275	0.49	-1.4
1,358,697	-		ABZR87_RS22275	0.49	-2.9
1,358,699	+		ABZR87_RS22275	0.49	-0.4
1,358,699	+		ABZR87_RS22275	0.49	-0.7
1,358,700	-		ABZR87_RS22275	0.49	-3.0
1,358,700	-		ABZR87_RS22275	0.49	-1.5
1,358,735	+		ABZR87_RS22275	0.52	-1.9
1,358,735	+		ABZR87_RS22275	0.52	-0.9
1,358,735	+		ABZR87_RS22275	0.52	-2.6
1,358,735	+		ABZR87_RS22275	0.52	-0.4
1,358,735	+		ABZR87_RS22275	0.52	+0.2
1,358,736	-		ABZR87_RS22275	0.52	+1.5
1,358,736	-		ABZR87_RS22275	0.52	-1.3
1,358,736	-		ABZR87_RS22275	0.52	-0.0
1,358,736	-		ABZR87_RS22275	0.52	-2.1
1,358,736	-		ABZR87_RS22275	0.52	-2.2
1,358,736	-		ABZR87_RS22275	0.52	-2.8
1,358,736	-		ABZR87_RS22275	0.52	-3.1
1,358,736	-		ABZR87_RS22275	0.52	-1.1
1,359,000	+		ABZR87_RS22275	0.74	+0.6
1,359,008	+		ABZR87_RS22275	0.75	+1.1
1,359,008	+		ABZR87_RS22275	0.75	-3.7
1,359,008	+		ABZR87_RS22275	0.75	-1.5
1,359,008	+		ABZR87_RS22275	0.75	-2.7
1,359,009	-		ABZR87_RS22275	0.75	-1.1
1,359,009	-		ABZR87_RS22275	0.75	-1.2
1,359,044	+		ABZR87_RS22275	0.78	-2.2
1,359,044	+		ABZR87_RS22275	0.78	-2.0
1,359,044	+		ABZR87_RS22275	0.78	-1.5
1,359,185	+		ABZR87_RS22275	0.89	-2.9
1,359,185	+		ABZR87_RS22275	0.89	-1.0
1,359,186	-		ABZR87_RS22275	0.89	+0.2
1,359,218	+				-2.1
1,359,218	+				-2.1
1,359,219	-				-1.2
1,359,219	-				-3.2
1,359,326	-				+0.2
1,359,333	-				-0.9
1,359,333	-				-0.1
1,359,368	+				-0.9
1,359,369	-				+0.6
1,359,527	+		ABZR87_RS22280	0.24	-2.5
1,359,527	+		ABZR87_RS22280	0.24	-0.8
1,359,578	+		ABZR87_RS22280	0.32	+2.6
1,359,578	+		ABZR87_RS22280	0.32	-2.3
1,359,578	+		ABZR87_RS22280	0.32	-2.3
1,359,578	+		ABZR87_RS22280	0.32	-2.8
1,359,579	-		ABZR87_RS22280	0.32	-1.8
1,359,579	-		ABZR87_RS22280	0.32	-0.6
1,360,052	+				-1.9
1,360,121	+		ABZR87_RS22285	0.17	-0.9
1,360,121	+		ABZR87_RS22285	0.17	-0.8
1,360,122	-		ABZR87_RS22285	0.17	-2.3
1,360,188	-		ABZR87_RS22285	0.34	-2.3
1,360,286	+		ABZR87_RS22285	0.58	-1.9
1,360,287	-		ABZR87_RS22285	0.58	+0.6
1,360,432	+				-1.9
1,360,432	+				-3.2
1,360,432	+				-0.9
1,360,432	+				-1.8
1,360,432	+				-2.4
1,360,433	-				-1.8
1,360,433	-				-2.8
1,360,433	-				-0.3
1,360,433	-				-2.5
1,360,433	-				-3.2
1,360,451	-				-2.0
1,360,451	-				-1.6
1,360,451	-				-0.8
1,360,451	-				-1.6
1,360,522	-				+0.7
1,360,616	+				+1.6
1,360,616	+				-1.4
1,360,617	-				-0.2
1,360,617	-				+0.7
1,360,660	+				-3.0
1,360,660	+				-0.6
1,360,660	+				-3.7
1,360,660	+				-1.2
1,360,660	+				-1.9
1,360,661	-				+0.6
1,360,661	-				-0.1
1,360,661	-				-0.1
1,360,661	-				-0.3
1,360,661	-				+0.8
1,360,672	+				-2.9
1,360,673	-				+1.5
1,360,673	-				-0.0
1,360,673	-				+0.3
1,360,738	+		ABZR87_RS22290	0.15	-0.4
1,360,738	+		ABZR87_RS22290	0.15	-1.4
1,360,826	-		ABZR87_RS22290	0.34	-1.7
1,361,014	+		ABZR87_RS22290	0.75	-0.7
1,361,014	+		ABZR87_RS22290	0.75	-2.6
1,361,014	+		ABZR87_RS22290	0.75	-0.8
1,361,014	+		ABZR87_RS22290	0.75	-1.5
1,361,015	-		ABZR87_RS22290	0.75	-2.6
1,361,015	-		ABZR87_RS22290	0.75	-1.3
1,361,015	-		ABZR87_RS22290	0.75	-2.6
1,361,015	-		ABZR87_RS22290	0.75	-3.9