Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22240

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
1,349,614	+				+1.3
1,349,698	+		ABZR87_RS22235	0.11	+0.4
1,349,699	-		ABZR87_RS22235	0.12	-0.4
1,349,699	-		ABZR87_RS22235	0.12	+0.7
1,349,830	+		ABZR87_RS22235	0.29	+1.3
1,349,986	+		ABZR87_RS22235	0.50	+0.3
1,350,108	-		ABZR87_RS22235	0.67	-1.5
1,350,226	+		ABZR87_RS22235	0.82	-0.8
1,350,227	-		ABZR87_RS22235	0.83	-0.6
1,350,227	-		ABZR87_RS22235	0.83	+0.6
1,350,227	-		ABZR87_RS22235	0.83	+1.9
1,350,343	+				+0.1
1,350,343	+				-0.7
1,350,343	+				+0.2
1,350,344	-				+0.6
1,350,344	-				+0.1
1,350,344	-				-0.2
1,350,372	+				-1.0
1,350,372	+				-1.2
1,350,372	+				-0.1
1,350,373	-				+0.0
1,350,389	+				-0.0
1,350,389	+				+1.0
1,350,390	-				-0.7
1,350,390	-				+1.8
1,350,390	-				-0.4
1,350,438	-				+0.5
1,350,533	+		ABZR87_RS22240	0.11	-3.6
1,350,533	+		ABZR87_RS22240	0.11	-2.6
1,350,555	-		ABZR87_RS22240	0.14	-2.2
1,350,582	-		ABZR87_RS22240	0.16	-2.8
1,350,662	+		ABZR87_RS22240	0.25	-0.5
1,350,662	+		ABZR87_RS22240	0.25	-3.1
1,350,663	-		ABZR87_RS22240	0.25	-2.4
1,350,776	+		ABZR87_RS22240	0.37	-2.0
1,350,777	-		ABZR87_RS22240	0.37	-3.3
1,350,777	-		ABZR87_RS22240	0.37	+0.7
1,350,777	-		ABZR87_RS22240	0.37	-1.7
1,350,831	+		ABZR87_RS22240	0.42	-2.7
1,350,832	-		ABZR87_RS22240	0.42	-2.0
1,350,861	-		ABZR87_RS22240	0.46	-1.6
1,350,920	+		ABZR87_RS22240	0.52	-2.6
1,350,920	+		ABZR87_RS22240	0.52	+1.1
1,350,921	-		ABZR87_RS22240	0.52	-2.3
1,350,921	-		ABZR87_RS22240	0.52	-1.8
1,350,921	-		ABZR87_RS22240	0.52	-2.8
1,350,921	-		ABZR87_RS22240	0.52	-1.6
1,350,921	-		ABZR87_RS22240	0.52	+0.3
1,351,032	-		ABZR87_RS22240	0.63	-0.6
1,351,032	-		ABZR87_RS22240	0.63	-1.4
1,351,032	-		ABZR87_RS22240	0.63	-0.3
1,351,199	+		ABZR87_RS22240	0.81	-2.4
1,351,200	-		ABZR87_RS22240	0.81	-2.9
1,351,371	+				-0.9
1,351,371	+				-3.3
1,351,371	+				-0.8
1,351,406	+				-1.1
1,351,406	+				+1.1
1,351,406	+				+0.6
1,351,406	+				-2.3
1,351,519	+				-2.7
1,351,520	-				-1.3
1,351,520	-				-2.6
1,351,520	-				-1.7
1,351,531	+				-0.8
1,351,531	+				-2.2
1,351,532	-				-2.5
1,351,532	-				-3.8
1,351,532	-				-1.2
1,351,532	-				-2.6
1,351,532	-				-3.3
1,351,532	-				-1.1
1,351,852	+		ABZR87_RS22245	0.21	-1.7
1,351,870	+		ABZR87_RS22245	0.22	-1.8
1,351,870	+		ABZR87_RS22245	0.22	-0.7
1,351,871	-		ABZR87_RS22245	0.22	-1.8
1,351,891	+		ABZR87_RS22245	0.23	-1.6
1,351,891	+		ABZR87_RS22245	0.23	-0.5
1,351,891	+		ABZR87_RS22245	0.23	-1.1
1,351,892	-		ABZR87_RS22245	0.23	-3.5
1,351,892	-		ABZR87_RS22245	0.23	-1.5
1,351,892	-		ABZR87_RS22245	0.23	+0.1
1,351,969	+		ABZR87_RS22245	0.27	-2.0
1,351,969	+		ABZR87_RS22245	0.27	-1.8
1,351,969	+		ABZR87_RS22245	0.27	-2.2
1,351,969	+		ABZR87_RS22245	0.27	-1.6
1,351,970	-		ABZR87_RS22245	0.27	+0.6
1,352,008	+		ABZR87_RS22245	0.29	-2.7
1,352,008	+		ABZR87_RS22245	0.29	-2.0
1,352,009	-		ABZR87_RS22245	0.29	-2.5
1,352,009	-		ABZR87_RS22245	0.29	-0.7
1,352,009	-		ABZR87_RS22245	0.29	-1.1
1,352,009	-		ABZR87_RS22245	0.29	-0.0
1,352,275	+		ABZR87_RS22245	0.43	-1.6
1,352,290	+		ABZR87_RS22245	0.43	-3.3
1,352,291	-		ABZR87_RS22245	0.44	-2.0
1,352,302	+		ABZR87_RS22245	0.44	-1.9
1,352,302	+		ABZR87_RS22245	0.44	-1.6