Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22170

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
1,336,464	+				-0.2
1,336,465	-				-0.6
1,336,465	-				+0.3
1,336,507	-				+0.6
1,336,566	+				-1.3
1,336,635	+		ABZR87_RS22160	0.25	-1.8
1,336,635	+		ABZR87_RS22160	0.25	-1.6
1,336,635	+		ABZR87_RS22160	0.25	-0.4
1,336,636	-		ABZR87_RS22160	0.26	-0.7
1,336,755	+		ABZR87_RS22160	0.59	-0.1
1,336,755	+		ABZR87_RS22160	0.59	+2.2
1,336,755	+		ABZR87_RS22160	0.59	-0.2
1,336,756	-		ABZR87_RS22160	0.59	-0.2
1,336,756	-		ABZR87_RS22160	0.59	+0.3
1,336,756	-		ABZR87_RS22160	0.59	+0.9
1,336,781	-		ABZR87_RS22160	0.66	-0.2
1,336,799	-		ABZR87_RS22160	0.71	-0.2
1,336,852	-		ABZR87_RS22160	0.86	+1.6
1,336,900	+				+0.6
1,336,900	+				+1.3
1,336,900	+				+0.1
1,336,900	+				-0.9
1,336,900	+				-1.3
1,336,901	-				+1.2
1,336,943	+				-0.2
1,336,943	+				+1.6
1,336,943	+				-0.2
1,336,943	+				+0.3
1,336,943	+				-0.5
1,336,944	-				+0.2
1,337,122	+		ABZR87_RS22165	0.37	-0.4
1,337,122	+		ABZR87_RS22165	0.37	-1.6
1,337,129	-		ABZR87_RS22165	0.39	-1.3
1,337,135	+		ABZR87_RS22165	0.40	-0.9
1,337,135	+		ABZR87_RS22165	0.40	-1.1
1,337,136	-		ABZR87_RS22165	0.40	-1.6
1,337,392	+				-0.1
1,337,392	+				-0.4
1,337,392	+				-0.2
1,337,392	+				+0.3
1,337,392	+				-1.4
1,337,392	+				+1.1
1,337,393	-				-0.4
1,337,393	-				-1.5
1,337,414	+				-2.0
1,337,414	+				+0.6
1,337,447	+				-1.4
1,337,447	+				+0.1
1,337,448	-				-0.6
1,337,458	+				+0.4
1,337,458	+				-0.1
1,337,458	+				+0.6
1,337,459	-				-1.6
1,337,459	-				+0.0
1,337,459	-				+0.2
1,337,459	-				-0.1
1,337,459	-				+1.3
1,337,459	-				+0.3
1,337,509	+				-0.8
1,337,509	+				+0.5
1,337,509	+				+0.1
1,337,510	-				-1.1
1,337,510	-				-0.4
1,337,566	+				+0.3
1,337,567	-				-0.1
1,337,567	-				-0.2
1,337,567	-				+0.1
1,337,569	+				-0.3
1,337,586	-				-1.6
1,337,586	-				-0.2
1,337,812	+		ABZR87_RS22170	0.17	-0.9
1,337,812	+		ABZR87_RS22170	0.17	-0.3
1,337,813	-		ABZR87_RS22170	0.17	+0.5
1,337,963	+		ABZR87_RS22170	0.25	-1.9
1,337,964	-		ABZR87_RS22170	0.25	-0.8
1,338,079	+		ABZR87_RS22170	0.30	-0.3
1,338,079	+		ABZR87_RS22170	0.30	-1.4
1,338,164	+		ABZR87_RS22170	0.35	+0.3
1,338,164	+		ABZR87_RS22170	0.35	-1.6
1,338,165	-		ABZR87_RS22170	0.35	-1.5
1,338,165	-		ABZR87_RS22170	0.35	+0.6
1,338,226	+		ABZR87_RS22170	0.38	+0.7
1,338,226	+		ABZR87_RS22170	0.38	-1.2
1,338,226	+		ABZR87_RS22170	0.38	-0.7
1,338,226	+		ABZR87_RS22170	0.38	-0.1
1,338,227	-		ABZR87_RS22170	0.38	+0.2
1,338,227	-		ABZR87_RS22170	0.38	-1.4
1,338,245	-		ABZR87_RS22170	0.38	-0.4
1,338,415	+		ABZR87_RS22170	0.47	+0.0
1,338,416	-		ABZR87_RS22170	0.47	-0.7
1,338,477	-		ABZR87_RS22170	0.50	-1.2
1,338,875	-		ABZR87_RS22170	0.69	+0.5
1,339,030	+		ABZR87_RS22170	0.77	-0.9
1,339,180	+		ABZR87_RS22170	0.84	-1.4
1,339,180	+		ABZR87_RS22170	0.84	-0.9
1,339,181	-		ABZR87_RS22170	0.84	-0.6
1,339,181	-		ABZR87_RS22170	0.84	-1.0
1,339,258	+		ABZR87_RS22170	0.88	-0.2
1,339,258	+		ABZR87_RS22170	0.88	-0.1
1,339,259	-		ABZR87_RS22170	0.88	+0.2
1,339,259	-		ABZR87_RS22170	0.88	+1.9
1,339,348	+				-1.2
1,339,349	-				-1.4
1,339,468	+				-1.2
1,339,468	+				-0.8
1,339,469	-				-0.7
1,339,469	-				-0.4
1,339,469	-				-1.0
1,339,469	-				-2.2
1,339,469	-				-0.4
1,339,490	+				-1.0
1,339,490	+				-0.5
1,339,490	+				+0.0
1,339,490	+				-2.1
1,339,495	+				-0.5
1,339,496	+				-0.0
1,339,497	-				-1.6
1,339,497	-				-0.2
1,339,497	-				+0.1
1,339,546	+				-0.4
1,339,547	-				+1.4
1,339,575	-				+3.2
1,339,584	+				+0.1
1,339,584	+				+1.1
1,339,585	-				+0.3
1,339,585	-				+0.3
1,339,705	+				+1.6
1,339,766	+				-1.2
1,339,819	+		ABZR87_RS22175	0.14	-0.3
1,339,820	-		ABZR87_RS22175	0.14	-0.8
1,340,019	-		ABZR87_RS22175	0.38	-1.4
1,340,131	+		ABZR87_RS22175	0.52	-2.4
1,340,131	+		ABZR87_RS22175	0.52	-1.6
1,340,132	-		ABZR87_RS22175	0.52	-2.4
1,340,132	-		ABZR87_RS22175	0.52	-2.1
1,340,132	-		ABZR87_RS22175	0.52	-0.8
1,340,180	-		ABZR87_RS22175	0.58	-1.8
1,340,180	-		ABZR87_RS22175	0.58	-3.3
1,340,180	-		ABZR87_RS22175	0.58	-2.8
1,340,180	-		ABZR87_RS22175	0.58	-1.6
1,340,180	-		ABZR87_RS22175	0.58	-1.6
1,340,252	+		ABZR87_RS22175	0.67	-0.8
1,340,252	+		ABZR87_RS22175	0.67	+1.1
1,340,252	+		ABZR87_RS22175	0.67	+2.6
1,340,252	+		ABZR87_RS22175	0.67	-1.6
1,340,252	+		ABZR87_RS22175	0.67	-0.1
1,340,252	+		ABZR87_RS22175	0.67	-0.4
1,340,252	+		ABZR87_RS22175	0.67	-0.6
1,340,252	+		ABZR87_RS22175	0.67	+2.6
1,340,253	-		ABZR87_RS22175	0.67	-0.2
1,340,253	-		ABZR87_RS22175	0.67	-0.9
1,340,305	+		ABZR87_RS22175	0.73	+0.2
1,340,305	+		ABZR87_RS22175	0.73	-1.9
1,340,383	+		ABZR87_RS22175	0.83	-1.2
1,340,384	-		ABZR87_RS22175	0.83	-1.1