Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS22100

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
1,325,795	+				-0.3
1,325,795	+				-0.3
1,325,796	-				-1.2
1,325,796	-				-3.7
1,325,810	+				-2.0
1,325,907	+				-0.2
1,326,036	+		ABZR87_RS22095	0.16	-0.0
1,326,036	+		ABZR87_RS22095	0.16	-1.8
1,326,037	-		ABZR87_RS22095	0.16	-1.7
1,326,037	-		ABZR87_RS22095	0.16	-0.1
1,326,037	-		ABZR87_RS22095	0.16	-0.8
1,326,078	+		ABZR87_RS22095	0.21	-0.7
1,326,079	-		ABZR87_RS22095	0.21	-1.8
1,326,079	-		ABZR87_RS22095	0.21	+1.7
1,326,087	+		ABZR87_RS22095	0.22	-0.5
1,326,087	+		ABZR87_RS22095	0.22	-0.7
1,326,088	-		ABZR87_RS22095	0.22	-1.2
1,326,088	-		ABZR87_RS22095	0.22	-0.3
1,326,102	+		ABZR87_RS22095	0.24	-0.8
1,326,102	+		ABZR87_RS22095	0.24	+0.2
1,326,102	+		ABZR87_RS22095	0.24	-2.1
1,326,103	-		ABZR87_RS22095	0.24	-0.2
1,326,103	-		ABZR87_RS22095	0.24	-0.8
1,326,103	-		ABZR87_RS22095	0.24	-0.3
1,326,114	+		ABZR87_RS22095	0.26	-1.9
1,326,114	+		ABZR87_RS22095	0.26	-2.2
1,326,115	-		ABZR87_RS22095	0.26	-0.6
1,326,115	-		ABZR87_RS22095	0.26	+0.3
1,326,115	-		ABZR87_RS22095	0.26	+1.2
1,326,146	+		ABZR87_RS22095	0.30	-0.8
1,326,146	+		ABZR87_RS22095	0.30	+0.8
1,326,147	-		ABZR87_RS22095	0.30	-1.2
1,326,261	+		ABZR87_RS22095	0.45	-0.7
1,326,262	-		ABZR87_RS22095	0.45	+0.1
1,326,513	+		ABZR87_RS22095	0.77	+0.3
1,326,513	+		ABZR87_RS22095	0.77	-1.8
1,326,513	+		ABZR87_RS22095	0.77	-1.3
1,326,513	+		ABZR87_RS22095	0.77	-0.7
1,326,513	+		ABZR87_RS22095	0.77	-0.8
1,326,513	+		ABZR87_RS22095	0.77	+2.2
1,326,514	-		ABZR87_RS22095	0.77	+0.6
1,326,514	-		ABZR87_RS22095	0.77	-0.4
1,326,514	-		ABZR87_RS22095	0.77	-3.0
1,326,804	-		ABZR87_RS22100	0.12	-0.5
1,326,838	+		ABZR87_RS22100	0.15	-2.0
1,326,838	+		ABZR87_RS22100	0.15	-0.1
1,326,980	+		ABZR87_RS22100	0.28	-0.6
1,326,981	-		ABZR87_RS22100	0.28	+0.3
1,326,981	-		ABZR87_RS22100	0.28	+0.3
1,327,001	+		ABZR87_RS22100	0.30	-0.5
1,327,001	+		ABZR87_RS22100	0.30	+2.6
1,327,001	+		ABZR87_RS22100	0.30	+0.6
1,327,001	+		ABZR87_RS22100	0.30	-0.6
1,327,002	-		ABZR87_RS22100	0.30	-0.9
1,327,098	-		ABZR87_RS22100	0.38	-0.1
1,327,160	+		ABZR87_RS22100	0.44	+0.1
1,327,160	+		ABZR87_RS22100	0.44	-0.3
1,327,161	-		ABZR87_RS22100	0.44	+1.6
1,327,161	-		ABZR87_RS22100	0.44	-0.2
1,327,294	+		ABZR87_RS22100	0.56	-0.7
1,327,295	-		ABZR87_RS22100	0.56	-0.7
1,327,295	-		ABZR87_RS22100	0.56	-0.6
1,327,397	+		ABZR87_RS22100	0.65	-0.4
1,327,398	-		ABZR87_RS22100	0.65	-1.7
1,327,398	-		ABZR87_RS22100	0.65	-0.6
1,327,673	+				-1.8
1,327,838	+		ABZR87_RS22105	0.10	-1.3
1,328,179	+		ABZR87_RS22105	0.68	-1.4
1,328,180	-		ABZR87_RS22105	0.68	-1.5
1,328,180	-		ABZR87_RS22105	0.68	+1.1
1,328,180	-		ABZR87_RS22105	0.68	-1.1
1,328,180	-		ABZR87_RS22105	0.68	-0.6
1,328,385	+				-1.1
1,328,422	-				+0.4
1,328,422	-				-0.3
1,328,463	+				+0.8
1,328,463	+				-0.4
1,328,463	+				+1.3
1,328,463	+				-1.2
1,328,464	-				-0.9
1,328,469	+				-0.2
1,328,469	+				-0.4
1,328,470	-				-0.8
1,328,470	-				-1.5
1,328,492	-		ABZR87_RS22110	0.11	+3.5
1,328,517	+		ABZR87_RS22110	0.13	+0.5
1,328,517	+		ABZR87_RS22110	0.13	-0.7
1,328,518	-		ABZR87_RS22110	0.13	-1.3
1,328,518	-		ABZR87_RS22110	0.13	-1.5
1,328,643	+		ABZR87_RS22110	0.24	-0.8
1,328,643	+		ABZR87_RS22110	0.24	-0.2
1,328,643	+		ABZR87_RS22110	0.24	-0.9
1,328,643	+		ABZR87_RS22110	0.24	-1.2
1,328,644	-		ABZR87_RS22110	0.24	-1.9
1,328,644	-		ABZR87_RS22110	0.24	+0.5
1,328,644	-		ABZR87_RS22110	0.24	+0.4
1,328,761	-		ABZR87_RS22110	0.34	+0.4