Experiment: Ra1_0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS19220 and ABZR87_RS19225 are separated by 66 nucleotides ABZR87_RS19225 and ABZR87_RS19230 are separated by 7 nucleotides ABZR87_RS19230 and ABZR87_RS19235 are separated by 2 nucleotides ABZR87_RS19235 and ABZR87_RS19240 overlap by 4 nucleotides
ABZR87_RS19220: ABZR87_RS19220 - DUF6622 family protein, at 676,048 to 676,551
_RS19220
ABZR87_RS19225: ABZR87_RS19225 - TOBE domain-containing protein, at 676,618 to 677,430
_RS19225
ABZR87_RS19230: ABZR87_RS19230 - NAD(P)H-dependent oxidoreductase, at 677,438 to 677,935
_RS19230
ABZR87_RS19235: ABZR87_RS19235 - ATP-binding cassette domain-containing protein, at 677,938 to 678,681
_RS19235
ABZR87_RS19240: ABZR87_RS19240 - molybdate ABC transporter permease subunit, at 678,678 to 679,364
_RS19240
Position (kb) 677
678 Strain fitness (log2 ratio) -2
-1
0
1 at 676.528 kb on - strand at 676.753 kb on + strand, within ABZR87_RS19225 at 676.753 kb on + strand, within ABZR87_RS19225 at 676.753 kb on + strand, within ABZR87_RS19225 at 676.754 kb on - strand, within ABZR87_RS19225 at 676.754 kb on - strand, within ABZR87_RS19225 at 677.004 kb on + strand, within ABZR87_RS19225 at 677.004 kb on + strand, within ABZR87_RS19225 at 677.004 kb on + strand, within ABZR87_RS19225 at 677.004 kb on + strand, within ABZR87_RS19225 at 677.005 kb on - strand, within ABZR87_RS19225 at 677.005 kb on - strand, within ABZR87_RS19225 at 677.242 kb on + strand, within ABZR87_RS19225 at 677.466 kb on - strand at 677.466 kb on - strand at 677.466 kb on - strand at 677.466 kb on - strand at 677.600 kb on + strand, within ABZR87_RS19230 at 677.600 kb on + strand, within ABZR87_RS19230 at 677.601 kb on - strand, within ABZR87_RS19230 at 677.670 kb on - strand, within ABZR87_RS19230 at 677.670 kb on - strand, within ABZR87_RS19230 at 677.670 kb on - strand, within ABZR87_RS19230 at 677.673 kb on - strand, within ABZR87_RS19230 at 677.673 kb on - strand, within ABZR87_RS19230 at 677.706 kb on - strand, within ABZR87_RS19230 at 677.874 kb on + strand, within ABZR87_RS19230 at 677.874 kb on + strand, within ABZR87_RS19230 at 677.875 kb on - strand, within ABZR87_RS19230 at 678.040 kb on + strand, within ABZR87_RS19235 at 678.061 kb on + strand, within ABZR87_RS19235 at 678.061 kb on + strand, within ABZR87_RS19235 at 678.061 kb on + strand, within ABZR87_RS19235 at 678.062 kb on - strand, within ABZR87_RS19235 at 678.062 kb on - strand, within ABZR87_RS19235 at 678.062 kb on - strand, within ABZR87_RS19235 at 678.062 kb on - strand, within ABZR87_RS19235 at 678.082 kb on - strand, within ABZR87_RS19235 at 678.082 kb on - strand, within ABZR87_RS19235 at 678.407 kb on + strand, within ABZR87_RS19235 at 678.408 kb on - strand, within ABZR87_RS19235 at 678.422 kb on + strand, within ABZR87_RS19235 at 678.422 kb on + strand, within ABZR87_RS19235 at 678.573 kb on - strand, within ABZR87_RS19235 at 678.681 kb on + strand at 678.681 kb on + strand at 678.681 kb on + strand at 678.681 kb on + strand at 678.682 kb on - strand at 678.682 kb on - strand at 678.817 kb on + strand, within ABZR87_RS19240 at 678.817 kb on + strand, within ABZR87_RS19240 at 678.817 kb on + strand, within ABZR87_RS19240 at 678.818 kb on - strand, within ABZR87_RS19240
Per-strain Table
Position Strand Gene LocusTag Fraction Ra1_0.1 remove 676,528 - +0.7 676,753 + ABZR87_RS19225 0.17 +1.5 676,753 + ABZR87_RS19225 0.17 -0.1 676,753 + ABZR87_RS19225 0.17 -0.4 676,754 - ABZR87_RS19225 0.17 +0.1 676,754 - ABZR87_RS19225 0.17 -1.4 677,004 + ABZR87_RS19225 0.47 -0.1 677,004 + ABZR87_RS19225 0.47 -0.0 677,004 + ABZR87_RS19225 0.47 +1.0 677,004 + ABZR87_RS19225 0.47 -1.3 677,005 - ABZR87_RS19225 0.48 -1.3 677,005 - ABZR87_RS19225 0.48 -0.3 677,242 + ABZR87_RS19225 0.77 -0.3 677,466 - -0.3 677,466 - +0.3 677,466 - +1.2 677,466 - +1.2 677,600 + ABZR87_RS19230 0.33 -1.4 677,600 + ABZR87_RS19230 0.33 -1.2 677,601 - ABZR87_RS19230 0.33 -1.1 677,670 - ABZR87_RS19230 0.47 -0.2 677,670 - ABZR87_RS19230 0.47 +0.5 677,670 - ABZR87_RS19230 0.47 -0.9 677,673 - ABZR87_RS19230 0.47 -1.3 677,673 - ABZR87_RS19230 0.47 +0.0 677,706 - ABZR87_RS19230 0.54 -0.1 677,874 + ABZR87_RS19230 0.88 +0.2 677,874 + ABZR87_RS19230 0.88 -0.4 677,875 - ABZR87_RS19230 0.88 -1.0 678,040 + ABZR87_RS19235 0.14 +0.5 678,061 + ABZR87_RS19235 0.17 +0.3 678,061 + ABZR87_RS19235 0.17 -0.5 678,061 + ABZR87_RS19235 0.17 -0.2 678,062 - ABZR87_RS19235 0.17 -0.6 678,062 - ABZR87_RS19235 0.17 -0.4 678,062 - ABZR87_RS19235 0.17 +0.6 678,062 - ABZR87_RS19235 0.17 +0.6 678,082 - ABZR87_RS19235 0.19 -0.1 678,082 - ABZR87_RS19235 0.19 -0.9 678,407 + ABZR87_RS19235 0.63 -0.4 678,408 - ABZR87_RS19235 0.63 -2.3 678,422 + ABZR87_RS19235 0.65 -0.0 678,422 + ABZR87_RS19235 0.65 +0.6 678,573 - ABZR87_RS19235 0.85 +1.3 678,681 + -1.9 678,681 + +0.6 678,681 + -0.3 678,681 + +0.2 678,682 - +0.3 678,682 - +0.6 678,817 + ABZR87_RS19240 0.20 -1.0 678,817 + ABZR87_RS19240 0.20 -0.2 678,817 + ABZR87_RS19240 0.20 +0.2 678,818 - ABZR87_RS19240 0.20 +0.4
Or see this region's nucleotide sequence