Experiment: Ra1_0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS17885 and ABZR87_RS17890 are separated by 155 nucleotides ABZR87_RS17890 and ABZR87_RS17895 are separated by 259 nucleotides
ABZR87_RS17885: ABZR87_RS17885 - membrane protein, at 369,080 to 370,696
_RS17885
ABZR87_RS17890: ABZR87_RS17890 - FlxA-like family protein, at 370,852 to 371,364
_RS17890
ABZR87_RS17895: ABZR87_RS17895 - ABC transporter ATP-binding protein, at 371,624 to 372,445
_RS17895
Position (kb) 370
371
372 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 369.867 kb on + strand, within ABZR87_RS17885 at 369.868 kb on - strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.029 kb on + strand, within ABZR87_RS17885 at 370.030 kb on - strand, within ABZR87_RS17885 at 370.030 kb on - strand, within ABZR87_RS17885 at 370.030 kb on - strand, within ABZR87_RS17885 at 370.030 kb on - strand, within ABZR87_RS17885 at 370.030 kb on - strand, within ABZR87_RS17885 at 370.030 kb on - strand, within ABZR87_RS17885 at 370.030 kb on - strand, within ABZR87_RS17885 at 370.030 kb on - strand, within ABZR87_RS17885 at 370.030 kb on - strand, within ABZR87_RS17885 at 370.222 kb on + strand, within ABZR87_RS17885 at 370.222 kb on + strand, within ABZR87_RS17885 at 370.223 kb on - strand, within ABZR87_RS17885 at 370.223 kb on - strand, within ABZR87_RS17885 at 370.452 kb on + strand, within ABZR87_RS17885 at 370.452 kb on + strand, within ABZR87_RS17885 at 370.453 kb on - strand, within ABZR87_RS17885 at 370.453 kb on - strand, within ABZR87_RS17885 at 370.453 kb on - strand, within ABZR87_RS17885 at 370.453 kb on - strand, within ABZR87_RS17885 at 370.495 kb on + strand, within ABZR87_RS17885 at 370.495 kb on + strand, within ABZR87_RS17885 at 370.495 kb on + strand, within ABZR87_RS17885 at 370.495 kb on + strand, within ABZR87_RS17885 at 370.496 kb on - strand, within ABZR87_RS17885 at 370.496 kb on - strand, within ABZR87_RS17885 at 370.496 kb on - strand, within ABZR87_RS17885 at 370.569 kb on + strand at 370.569 kb on + strand at 370.570 kb on - strand at 370.570 kb on - strand at 370.587 kb on + strand at 370.587 kb on + strand at 370.587 kb on + strand at 370.588 kb on - strand at 370.588 kb on - strand at 370.972 kb on + strand, within ABZR87_RS17890 at 370.973 kb on - strand, within ABZR87_RS17890 at 370.973 kb on - strand, within ABZR87_RS17890 at 371.028 kb on + strand, within ABZR87_RS17890 at 371.028 kb on + strand, within ABZR87_RS17890 at 371.029 kb on - strand, within ABZR87_RS17890 at 371.029 kb on - strand, within ABZR87_RS17890 at 371.029 kb on - strand, within ABZR87_RS17890 at 371.307 kb on + strand, within ABZR87_RS17890 at 371.386 kb on + strand at 371.401 kb on + strand at 371.401 kb on + strand at 371.401 kb on + strand at 371.402 kb on - strand at 371.402 kb on - strand at 371.530 kb on + strand at 371.530 kb on + strand at 371.531 kb on - strand at 371.540 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ra1_0.1 remove 369,867 + ABZR87_RS17885 0.49 -0.3 369,868 - ABZR87_RS17885 0.49 -0.9 370,029 + ABZR87_RS17885 0.59 -0.3 370,029 + ABZR87_RS17885 0.59 -1.6 370,029 + ABZR87_RS17885 0.59 +0.1 370,029 + ABZR87_RS17885 0.59 -1.1 370,029 + ABZR87_RS17885 0.59 +0.6 370,029 + ABZR87_RS17885 0.59 -1.9 370,029 + ABZR87_RS17885 0.59 -1.7 370,029 + ABZR87_RS17885 0.59 -0.5 370,029 + ABZR87_RS17885 0.59 -0.3 370,029 + ABZR87_RS17885 0.59 +0.4 370,029 + ABZR87_RS17885 0.59 -2.2 370,030 - ABZR87_RS17885 0.59 +0.9 370,030 - ABZR87_RS17885 0.59 -0.4 370,030 - ABZR87_RS17885 0.59 -0.6 370,030 - ABZR87_RS17885 0.59 -0.5 370,030 - ABZR87_RS17885 0.59 +1.4 370,030 - ABZR87_RS17885 0.59 -2.3 370,030 - ABZR87_RS17885 0.59 -0.0 370,030 - ABZR87_RS17885 0.59 -1.3 370,030 - ABZR87_RS17885 0.59 -1.1 370,222 + ABZR87_RS17885 0.71 -1.2 370,222 + ABZR87_RS17885 0.71 -0.5 370,223 - ABZR87_RS17885 0.71 -0.1 370,223 - ABZR87_RS17885 0.71 -0.4 370,452 + ABZR87_RS17885 0.85 -3.5 370,452 + ABZR87_RS17885 0.85 -0.4 370,453 - ABZR87_RS17885 0.85 -2.8 370,453 - ABZR87_RS17885 0.85 -0.6 370,453 - ABZR87_RS17885 0.85 -0.1 370,453 - ABZR87_RS17885 0.85 +1.3 370,495 + ABZR87_RS17885 0.88 -0.1 370,495 + ABZR87_RS17885 0.88 +0.6 370,495 + ABZR87_RS17885 0.88 +1.3 370,495 + ABZR87_RS17885 0.88 +0.8 370,496 - ABZR87_RS17885 0.88 +0.4 370,496 - ABZR87_RS17885 0.88 +0.5 370,496 - ABZR87_RS17885 0.88 -0.5 370,569 + +0.0 370,569 + +0.2 370,570 - -1.8 370,570 - +0.7 370,587 + -0.4 370,587 + -1.2 370,587 + +0.8 370,588 - -1.9 370,588 - -0.4 370,972 + ABZR87_RS17890 0.23 -0.2 370,973 - ABZR87_RS17890 0.24 +0.2 370,973 - ABZR87_RS17890 0.24 -0.6 371,028 + ABZR87_RS17890 0.34 -1.1 371,028 + ABZR87_RS17890 0.34 -0.9 371,029 - ABZR87_RS17890 0.35 +0.1 371,029 - ABZR87_RS17890 0.35 -0.1 371,029 - ABZR87_RS17890 0.35 -1.0 371,307 + ABZR87_RS17890 0.89 -3.1 371,386 + +0.5 371,401 + +0.1 371,401 + -0.0 371,401 + +1.3 371,402 - -0.0 371,402 - -0.1 371,530 + -0.0 371,530 + -0.5 371,531 - -0.6 371,540 - -0.7
Or see this region's nucleotide sequence