Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16875

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
139,958	+		ABZR87_RS16870	0.67	+1.7
139,983	+		ABZR87_RS16870	0.69	-0.1
139,983	+		ABZR87_RS16870	0.69	+1.0
140,126	+		ABZR87_RS16870	0.81	+1.1
140,126	+		ABZR87_RS16870	0.81	+0.0
140,126	+		ABZR87_RS16870	0.81	-0.2
140,126	+		ABZR87_RS16870	0.81	-0.7
140,126	+		ABZR87_RS16870	0.81	+0.4
140,127	-		ABZR87_RS16870	0.81	+0.6
140,161	+		ABZR87_RS16870	0.83	+0.5
140,161	+		ABZR87_RS16870	0.83	-0.2
140,161	+		ABZR87_RS16870	0.83	+0.1
140,162	-		ABZR87_RS16870	0.83	+0.8
140,162	-		ABZR87_RS16870	0.83	-1.0
140,167	-		ABZR87_RS16870	0.84	-0.3
140,263	+				-0.0
140,264	-				-0.1
140,264	-				-1.1
140,264	-				-0.0
140,264	-				+0.4
140,280	+				-1.0
140,281	-				-2.1
140,281	-				-0.8
140,281	-				+0.2
140,287	+				-1.4
140,287	+				+0.1
140,287	+				-0.1
140,287	+				+0.1
140,288	-				+0.3
140,288	-				-0.4
140,364	+				-0.8
140,365	-				-1.3
140,373	-				-0.7
140,373	-				+2.0
140,396	+				-0.3
140,396	+				-0.1
140,414	+				+1.0
140,481	+				-1.0
140,481	+				+1.2
140,502	+				+0.6
140,503	-				+0.2
140,503	-				-0.5
140,503	-				-1.4
140,527	-				-0.8
140,583	-				-1.5
140,593	+				+0.7
140,593	+				+1.1
140,593	+				+0.3
140,594	-				+1.6
140,594	-				-0.2
140,594	-				-0.8
140,594	-				-1.8
140,594	-				-0.3
140,600	+				-0.6
140,600	+				-1.6
140,600	+				+0.4
140,601	-				+2.6
140,642	+				-0.7
140,643	-				-0.3
140,687	+				-1.0
140,759	+				+0.6
140,759	+				-1.2
140,760	-				-0.4
140,760	-				+0.3
140,760	-				-0.5
140,839	+				+1.6
140,839	+				+0.0
140,839	+				-0.4
140,839	+				-0.2
140,840	-				-1.0
140,840	-				+0.1
140,881	+				-0.2
140,881	+				+0.3
140,881	+				-0.1
140,881	+				-0.5
140,882	-				+0.5
140,882	-				-0.2
140,882	-				+0.5
141,021	+		ABZR87_RS16875	0.37	-1.7
141,022	-		ABZR87_RS16875	0.38	-0.9
141,224	+		ABZR87_RS16875	0.86	-2.0
141,224	+		ABZR87_RS16875	0.86	+0.5
141,224	+		ABZR87_RS16875	0.86	-0.9
141,225	-		ABZR87_RS16875	0.86	-0.1
141,225	-		ABZR87_RS16875	0.86	+0.2
141,225	-		ABZR87_RS16875	0.86	-1.7
141,225	-		ABZR87_RS16875	0.86	-1.1
141,309	+				+0.8
141,309	+				-0.0
141,310	-				-0.1
141,310	-				+1.6
141,310	-				+0.1
141,310	-				+0.0
141,310	-				-1.9
141,310	-				+0.3
141,337	-				+0.9
141,337	-				+0.4
141,412	+				-0.4
141,413	-				-0.5
141,473	+				+0.6
141,474	-				+0.5
141,479	+				+0.2
141,479	+				+1.2
141,480	-				+0.1
141,480	-				-0.4
141,579	-				+0.0
141,580	+				+0.9
141,580	+				-0.4
141,581	-				-2.0
141,581	-				-0.2
141,603	-				+0.6
141,612	+				+1.3
141,613	-				+0.3
141,743	+				+0.5
141,829	+		ABZR87_RS16880	0.12	+1.4
141,829	+		ABZR87_RS16880	0.12	-0.1
141,829	+		ABZR87_RS16880	0.12	-0.1
141,829	+		ABZR87_RS16880	0.12	+0.6
141,829	+		ABZR87_RS16880	0.12	+0.6
141,829	+		ABZR87_RS16880	0.12	-0.4
141,829	+		ABZR87_RS16880	0.12	+0.2
141,829	+		ABZR87_RS16880	0.12	-1.1
141,829	+		ABZR87_RS16880	0.12	+0.7
141,829	+		ABZR87_RS16880	0.12	-0.2
141,829	+		ABZR87_RS16880	0.12	+0.2
141,830	-		ABZR87_RS16880	0.12	-0.3
141,830	-		ABZR87_RS16880	0.12	-0.8
141,830	-		ABZR87_RS16880	0.12	+0.7
141,830	-		ABZR87_RS16880	0.12	-0.4
141,830	-		ABZR87_RS16880	0.12	-0.8
141,830	-		ABZR87_RS16880	0.12	-0.6
141,924	+		ABZR87_RS16880	0.21	-0.3
141,934	-		ABZR87_RS16880	0.22	-1.1
141,934	-		ABZR87_RS16880	0.22	+0.5
142,035	+		ABZR87_RS16880	0.32	-0.6
142,036	-		ABZR87_RS16880	0.32	+1.1
142,047	+		ABZR87_RS16880	0.33	-0.0
142,047	+		ABZR87_RS16880	0.33	+3.6
142,048	-		ABZR87_RS16880	0.33	-2.2
142,048	-		ABZR87_RS16880	0.33	+0.4
142,048	-		ABZR87_RS16880	0.33	-1.3
142,069	-		ABZR87_RS16880	0.35	-1.7
142,084	+		ABZR87_RS16880	0.37	-0.1
142,084	+		ABZR87_RS16880	0.37	+0.2
142,084	+		ABZR87_RS16880	0.37	-1.0
142,119	+		ABZR87_RS16880	0.40	-0.9
142,265	+		ABZR87_RS16880	0.55	+0.5
142,265	+		ABZR87_RS16880	0.55	+0.2
142,265	+		ABZR87_RS16880	0.55	+0.1
142,265	+		ABZR87_RS16880	0.55	-0.4
142,265	+		ABZR87_RS16880	0.55	+0.3
142,265	+		ABZR87_RS16880	0.55	+0.4
142,266	-		ABZR87_RS16880	0.55	+1.2
142,266	-		ABZR87_RS16880	0.55	+0.9
142,266	-		ABZR87_RS16880	0.55	+0.7
142,266	-		ABZR87_RS16880	0.55	-0.8
142,266	-		ABZR87_RS16880	0.55	-0.3