Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16665

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
86,829	+				-0.1
86,829	+				-0.7
86,829	+				+0.7
86,829	+				+0.1
86,829	+				+0.1
86,829	+				+2.9
86,830	-				+1.2
86,830	-				-1.7
86,830	-				-0.4
86,830	-				+0.4
86,830	-				+0.4
86,830	-				-1.3
86,830	-				+1.6
86,830	-				+0.1
86,830	-				+1.2
86,830	-				-0.3
86,830	-				+0.2
86,830	-				+1.1
86,842	-				-0.0
86,842	-				-0.5
86,842	-				-0.4
86,842	-				-1.1
86,842	-				-1.4
86,842	-				-0.4
86,850	-				-0.4
86,942	+				-0.5
86,942	+				-0.8
86,942	+				-0.1
86,943	-				-0.9
86,943	-				+0.3
86,972	+				+0.4
86,972	+				+0.3
86,972	+				+2.6
87,025	+				-0.0
87,026	-				-1.4
87,026	-				-1.3
87,026	-				-0.5
87,039	-				-0.8
87,057	+				+1.1
87,058	-				-0.8
87,096	-		ABZR87_RS16660	0.11	-1.2
87,096	-		ABZR87_RS16660	0.11	+1.0
87,231	-		ABZR87_RS16660	0.36	-0.2
87,231	-		ABZR87_RS16660	0.36	-1.1
87,333	-		ABZR87_RS16660	0.55	+0.2
87,356	+		ABZR87_RS16660	0.59	-0.4
87,356	+		ABZR87_RS16660	0.59	-0.3
87,357	-		ABZR87_RS16660	0.59	+0.6
87,357	-		ABZR87_RS16660	0.59	-0.6
87,590	+				-0.2
87,590	+				-1.6
87,590	+				-1.1
87,590	+				-1.8
87,590	+				-0.4
87,590	+				-1.9
87,590	+				-0.8
87,590	+				-0.9
87,590	+				-1.2
87,591	-				-0.9
87,591	-				-0.5
87,591	-				-1.9
87,683	+				+0.2
87,683	+				+1.0
87,683	+				-0.5
87,683	+				-0.1
87,684	-				+0.7
87,720	+				+0.7
87,720	+				+2.3
87,720	+				-0.0
87,720	+				-0.8
87,720	+				-1.3
87,720	+				-0.8
87,720	+				+0.8
87,720	+				-2.3
87,720	+				-0.4
87,720	+				-0.2
87,721	-				-0.9
87,721	-				-1.0
87,721	-				-2.7
87,721	-				+0.9
87,721	-				-0.6
87,721	-				+0.6
87,721	-				-1.8
87,721	-				+0.9
87,721	-				-0.1
87,721	-				+0.8
87,861	+		ABZR87_RS16665	0.25	-2.0
87,915	+		ABZR87_RS16665	0.35	-1.4
87,915	+		ABZR87_RS16665	0.35	-0.8
87,915	+		ABZR87_RS16665	0.35	-1.1
87,918	-		ABZR87_RS16665	0.35	-0.6
87,918	-		ABZR87_RS16665	0.35	-0.1
87,918	-		ABZR87_RS16665	0.35	+0.7
87,918	-		ABZR87_RS16665	0.35	+0.5
87,918	-		ABZR87_RS16665	0.35	-1.3
87,918	-		ABZR87_RS16665	0.35	-0.1
87,930	+		ABZR87_RS16665	0.37	-0.6
87,930	+		ABZR87_RS16665	0.37	-0.4
87,930	+		ABZR87_RS16665	0.37	-0.6
87,931	-		ABZR87_RS16665	0.37	-1.1
88,293	+				+0.5
88,293	+				-0.2
88,294	-				-0.3
88,332	+				-0.0
88,333	-				+0.3
88,389	+				+0.1
88,391	+				-0.0
88,392	-				-0.6
88,392	-				+1.0
88,443	+				-1.6
88,443	+				-1.7
88,443	+				+1.6
88,443	+				-0.8
88,443	+				+0.6
88,443	+				-0.1
88,443	+				-0.4
88,443	+				+0.8
88,443	+				+0.8
88,443	+				+0.7
88,443	+				+0.0
88,444	-				-0.1
88,444	-				-0.5
88,444	-				-0.3
88,444	-				-1.3
88,444	-				+0.7
88,444	-				-0.2
88,444	-				-0.6
88,444	-				+0.7
88,444	-				+1.6
88,444	-				+0.5
88,457	+				-0.1
88,470	-				-1.1
88,612	+		ABZR87_RS16670	0.18	-0.1
88,675	+		ABZR87_RS16670	0.32	+0.4
88,675	+		ABZR87_RS16670	0.32	-0.9
88,676	-		ABZR87_RS16670	0.33	-1.4
88,812	+		ABZR87_RS16670	0.64	+0.1
88,813	-		ABZR87_RS16670	0.64	-1.8
88,854	+		ABZR87_RS16670	0.74	+0.4
88,855	-		ABZR87_RS16670	0.74	-0.3
88,924	+		ABZR87_RS16670	0.90	+0.5
88,966	+				+0.7
88,967	-				-0.3
88,967	-				+0.4
88,967	-				+0.2
88,967	-				-0.7
88,967	-				+0.6
88,967	-				-0.4
88,985	+				-0.3
89,204	+		ABZR87_RS16675	0.21	-0.8
89,204	+		ABZR87_RS16675	0.21	-1.3
89,204	+		ABZR87_RS16675	0.21	+0.1
89,205	-		ABZR87_RS16675	0.21	+0.3
89,238	+		ABZR87_RS16675	0.25	-0.6
89,238	+		ABZR87_RS16675	0.25	-0.9
89,238	+		ABZR87_RS16675	0.25	-0.4
89,239	-		ABZR87_RS16675	0.25	-1.7
89,239	-		ABZR87_RS16675	0.25	+0.2
89,239	-		ABZR87_RS16675	0.25	+1.0
89,239	-		ABZR87_RS16675	0.25	-0.9
89,239	-		ABZR87_RS16675	0.25	+0.1
89,239	-		ABZR87_RS16675	0.25	+1.0