Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16115

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
3,405,479	+		ABZR87_RS16110	0.42	-0.4
3,405,749	+		ABZR87_RS16110	0.61	-0.2
3,405,749	+		ABZR87_RS16110	0.61	-0.4
3,405,749	+		ABZR87_RS16110	0.61	+2.3
3,405,749	+		ABZR87_RS16110	0.61	-0.4
3,405,750	-		ABZR87_RS16110	0.61	+0.0
3,405,750	-		ABZR87_RS16110	0.61	-2.1
3,405,950	+		ABZR87_RS16110	0.75	+0.7
3,405,950	+		ABZR87_RS16110	0.75	+0.4
3,405,950	+		ABZR87_RS16110	0.75	-0.6
3,405,950	+		ABZR87_RS16110	0.75	-0.5
3,405,951	-		ABZR87_RS16110	0.75	-0.2
3,405,951	-		ABZR87_RS16110	0.75	-0.7
3,405,951	-		ABZR87_RS16110	0.75	-2.0
3,405,951	-		ABZR87_RS16110	0.75	-0.8
3,406,085	+		ABZR87_RS16110	0.85	+0.5
3,406,086	-		ABZR87_RS16110	0.85	-0.5
3,406,262	+				-0.3
3,406,263	-				-0.2
3,406,263	-				+0.7
3,406,304	+				-0.7
3,406,586	-		ABZR87_RS16115	0.31	-0.6
3,406,595	+		ABZR87_RS16115	0.33	-1.1
3,406,599	+		ABZR87_RS16115	0.33	-0.8
3,406,599	+		ABZR87_RS16115	0.33	-0.2
3,406,599	+		ABZR87_RS16115	0.33	-0.6
3,406,599	+		ABZR87_RS16115	0.33	+0.2
3,406,600	-		ABZR87_RS16115	0.33	-1.0
3,406,600	-		ABZR87_RS16115	0.33	-1.0
3,406,702	+		ABZR87_RS16115	0.47	-1.2
3,406,702	+		ABZR87_RS16115	0.47	-0.7
3,406,702	+		ABZR87_RS16115	0.47	-1.5
3,406,703	-		ABZR87_RS16115	0.47	-2.5
3,406,810	+		ABZR87_RS16115	0.61	-2.2
3,406,811	-		ABZR87_RS16115	0.61	-0.7
3,406,943	+		ABZR87_RS16115	0.78	+0.7
3,407,035	+				-0.3
3,407,036	-				+0.5
3,407,036	-				+0.7
3,407,036	-				+0.6
3,407,036	-				-0.5
3,407,102	+				+0.2
3,407,102	+				-1.3
3,407,102	+				+0.5
3,407,103	-				+0.3
3,407,103	-				-0.1
3,407,103	-				-1.5
3,407,105	+				-0.4
3,407,105	-				-2.0
3,407,105	-				+0.1
3,407,179	+				+0.3
3,407,179	+				+0.3
3,407,180	-				-0.2
3,407,183	+				+0.5
3,407,183	+				+0.8
3,407,183	+				-0.6
3,407,213	+				+1.1
3,407,214	-				+1.0
3,407,214	-				-0.8
3,407,214	-				+0.6
3,407,214	-				-1.2
3,407,273	+				+1.4
3,407,273	+				-0.3
3,407,273	+				+0.9
3,407,273	+				+1.3
3,407,316	+				-1.1
3,407,361	+				+0.3
3,407,361	+				+0.2
3,407,361	+				+0.1
3,407,361	+				+0.1
3,407,361	+				+0.7
3,407,361	+				+0.4
3,407,361	+				+0.4
3,407,362	-				-0.5
3,407,362	-				-0.7
3,407,445	+		ABZR87_RS16120	0.16	-0.6
3,407,445	+		ABZR87_RS16120	0.16	+0.1
3,407,445	+		ABZR87_RS16120	0.16	-0.2
3,407,445	+		ABZR87_RS16120	0.16	-0.0
3,407,445	+		ABZR87_RS16120	0.16	-1.2
3,407,445	+		ABZR87_RS16120	0.16	+0.3
3,407,445	+		ABZR87_RS16120	0.16	-0.7
3,407,445	+		ABZR87_RS16120	0.16	+0.4
3,407,445	+		ABZR87_RS16120	0.16	-0.1
3,407,446	-		ABZR87_RS16120	0.16	-1.1
3,407,446	-		ABZR87_RS16120	0.16	-1.0
3,407,446	-		ABZR87_RS16120	0.16	+0.4
3,407,446	-		ABZR87_RS16120	0.16	-1.9
3,407,446	-		ABZR87_RS16120	0.16	-2.2
3,407,479	-		ABZR87_RS16120	0.19	+0.1
3,407,610	+		ABZR87_RS16120	0.29	-1.0
3,407,610	+		ABZR87_RS16120	0.29	+1.1
3,407,610	+		ABZR87_RS16120	0.29	+0.2
3,407,610	+		ABZR87_RS16120	0.29	-0.0
3,407,610	+		ABZR87_RS16120	0.29	+0.9
3,407,611	-		ABZR87_RS16120	0.29	-0.5
3,407,611	-		ABZR87_RS16120	0.29	+0.8
3,407,611	-		ABZR87_RS16120	0.29	-0.8
3,407,611	-		ABZR87_RS16120	0.29	-1.0
3,407,679	+		ABZR87_RS16120	0.34	+0.8
3,407,679	+		ABZR87_RS16120	0.34	-0.0
3,407,679	+		ABZR87_RS16120	0.34	-0.1
3,407,680	-		ABZR87_RS16120	0.34	-2.1
3,407,800	-		ABZR87_RS16120	0.43	-1.4
3,407,878	-		ABZR87_RS16120	0.49	+0.2
3,407,878	-		ABZR87_RS16120	0.49	+0.6
3,408,030	+		ABZR87_RS16120	0.60	+0.4
3,408,030	+		ABZR87_RS16120	0.60	-0.1
3,408,030	+		ABZR87_RS16120	0.60	-1.1
3,408,031	-		ABZR87_RS16120	0.60	+0.4
3,408,031	-		ABZR87_RS16120	0.60	+1.4
3,408,031	-		ABZR87_RS16120	0.60	-0.8
3,408,054	+		ABZR87_RS16120	0.62	-0.3