Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16005

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
3,382,734	-				+0.7
3,382,744	-				-1.0
3,382,870	+		ABZR87_RS16000	0.23	-0.2
3,382,973	+		ABZR87_RS16000	0.34	+0.2
3,382,974	-		ABZR87_RS16000	0.34	-0.7
3,382,994	+		ABZR87_RS16000	0.36	-0.2
3,382,994	+		ABZR87_RS16000	0.36	-0.3
3,382,995	-		ABZR87_RS16000	0.36	-0.4
3,383,060	+		ABZR87_RS16000	0.43	+0.2
3,383,061	-		ABZR87_RS16000	0.43	-0.3
3,383,194	+		ABZR87_RS16000	0.57	+0.3
3,383,194	+		ABZR87_RS16000	0.57	-0.1
3,383,194	+		ABZR87_RS16000	0.57	+1.0
3,383,195	-		ABZR87_RS16000	0.57	+0.0
3,383,195	-		ABZR87_RS16000	0.57	-0.2
3,383,195	-		ABZR87_RS16000	0.57	+0.1
3,383,212	-		ABZR87_RS16000	0.59	+2.0
3,383,212	-		ABZR87_RS16000	0.59	-0.2
3,383,212	-		ABZR87_RS16000	0.59	-0.4
3,383,421	-		ABZR87_RS16000	0.81	-0.8
3,383,421	-		ABZR87_RS16000	0.81	+0.1
3,383,421	-		ABZR87_RS16000	0.81	-0.4
3,383,421	-		ABZR87_RS16000	0.81	-0.3
3,383,541	-				+0.2
3,383,541	-				-0.1
3,383,564	+				-0.8
3,383,565	-				-1.0
3,383,675	-				-0.4
3,383,675	-				-1.6
3,383,791	+		ABZR87_RS16005	0.16	+0.3
3,383,791	+		ABZR87_RS16005	0.16	+0.6
3,383,792	-		ABZR87_RS16005	0.16	-1.1
3,383,813	-		ABZR87_RS16005	0.19	+1.7
3,384,156	+		ABZR87_RS16005	0.55	-1.7
3,384,156	+		ABZR87_RS16005	0.55	-0.1
3,384,192	+		ABZR87_RS16005	0.59	-1.9
3,384,234	+		ABZR87_RS16005	0.64	-0.6
3,384,234	+		ABZR87_RS16005	0.64	-1.3
3,384,378	+		ABZR87_RS16005	0.79	-0.5
3,384,378	+		ABZR87_RS16005	0.79	+1.1
3,384,378	+		ABZR87_RS16005	0.79	-0.4
3,384,378	+		ABZR87_RS16005	0.79	-2.4
3,384,450	+		ABZR87_RS16005	0.87	+0.4
3,384,450	+		ABZR87_RS16005	0.87	-1.1
3,384,450	+		ABZR87_RS16005	0.87	+0.5
3,384,451	-		ABZR87_RS16005	0.87	-0.1
3,384,451	-		ABZR87_RS16005	0.87	-0.3
3,384,469	-		ABZR87_RS16005	0.89	-0.6
3,384,713	+				-1.7
3,384,818	+				+0.5
3,384,929	+				+0.8
3,384,929	+				+1.0
3,384,929	+				-0.7
3,384,929	+				+0.1
3,384,930	-				+1.4
3,384,930	-				-2.0
3,384,930	-				+0.9
3,384,956	+		ABZR87_RS16010	0.11	-0.6
3,385,115	-		ABZR87_RS16010	0.25	-0.8
3,385,115	-		ABZR87_RS16010	0.25	+1.0
3,385,208	+		ABZR87_RS16010	0.33	+0.3
3,385,208	+		ABZR87_RS16010	0.33	-0.8
3,385,209	-		ABZR87_RS16010	0.34	+0.6
3,385,209	-		ABZR87_RS16010	0.34	-0.4
3,385,278	-		ABZR87_RS16010	0.40	-1.0
3,385,289	+		ABZR87_RS16010	0.41	-3.0
3,385,289	+		ABZR87_RS16010	0.41	+0.3
3,385,379	+		ABZR87_RS16010	0.49	+0.1
3,385,379	+		ABZR87_RS16010	0.49	-0.3
3,385,380	-		ABZR87_RS16010	0.49	+2.3
3,385,418	+		ABZR87_RS16010	0.52	+0.9
3,385,418	+		ABZR87_RS16010	0.52	-0.5
3,385,419	-		ABZR87_RS16010	0.52	-0.5
3,385,481	+		ABZR87_RS16010	0.58	-1.4
3,385,481	+		ABZR87_RS16010	0.58	+0.4
3,385,482	-		ABZR87_RS16010	0.58	-0.4
3,385,482	-		ABZR87_RS16010	0.58	-1.0
3,385,482	-		ABZR87_RS16010	0.58	-0.8
3,385,482	-		ABZR87_RS16010	0.58	-0.7
3,385,482	-		ABZR87_RS16010	0.58	-1.3
3,385,482	-		ABZR87_RS16010	0.58	+1.1