Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15615
Experiment: Ra1_0.1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ra1_0.1 |
---|---|---|---|---|---|
remove | |||||
3,293,194 | - | ABZR87_RS15615 | 0.41 | -0.2 | |
3,293,194 | - | ABZR87_RS15615 | 0.41 | -0.7 | |
3,293,196 | - | ABZR87_RS15615 | 0.41 | -0.1 | |
3,293,196 | - | ABZR87_RS15615 | 0.41 | -0.5 | |
3,293,196 | - | ABZR87_RS15615 | 0.41 | -0.9 | |
3,293,196 | - | ABZR87_RS15615 | 0.41 | -0.4 | |
3,293,196 | - | ABZR87_RS15615 | 0.41 | -1.1 | |
3,293,196 | - | ABZR87_RS15615 | 0.41 | -0.9 | |
3,293,196 | - | ABZR87_RS15615 | 0.41 | -0.3 | |
3,293,196 | - | ABZR87_RS15615 | 0.41 | +1.2 | |
3,293,653 | + | +1.3 | |||
3,293,654 | - | +0.8 | |||
3,293,698 | + | +0.8 | |||
3,293,698 | + | +0.0 | |||
3,293,698 | + | -0.0 | |||
3,293,698 | + | +0.8 | |||
3,293,699 | - | -1.3 | |||
3,293,699 | - | +0.1 | |||
3,293,750 | + | ABZR87_RS15620 | 0.13 | -0.1 | |
3,293,750 | + | ABZR87_RS15620 | 0.13 | +0.1 | |
3,293,949 | - | ABZR87_RS15620 | 0.29 | -0.6 | |
3,294,394 | + | ABZR87_RS15620 | 0.66 | -0.7 | |
3,294,395 | - | ABZR87_RS15620 | 0.66 | -0.0 | |
3,294,395 | - | ABZR87_RS15620 | 0.66 | -0.6 |
Or see this region's nucleotide sequence