Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15075

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
3,180,298	+		ABZR87_RS15070	0.34	-0.0
3,180,391	+		ABZR87_RS15070	0.41	-1.1
3,180,392	-		ABZR87_RS15070	0.41	-0.1
3,180,392	-		ABZR87_RS15070	0.41	+2.1
3,180,403	+		ABZR87_RS15070	0.42	+0.1
3,180,403	+		ABZR87_RS15070	0.42	-0.2
3,180,404	-		ABZR87_RS15070	0.42	-0.2
3,180,404	-		ABZR87_RS15070	0.42	+0.4
3,180,415	+		ABZR87_RS15070	0.43	-1.2
3,180,416	-		ABZR87_RS15070	0.43	-0.2
3,180,416	-		ABZR87_RS15070	0.43	-0.0
3,180,457	+		ABZR87_RS15070	0.46	+1.3
3,180,457	+		ABZR87_RS15070	0.46	-0.3
3,180,457	+		ABZR87_RS15070	0.46	+0.0
3,180,458	-		ABZR87_RS15070	0.46	-1.1
3,180,458	-		ABZR87_RS15070	0.46	-0.7
3,180,458	-		ABZR87_RS15070	0.46	+0.3
3,180,670	+		ABZR87_RS15070	0.63	+2.3
3,180,670	+		ABZR87_RS15070	0.63	+0.7
3,180,670	+		ABZR87_RS15070	0.63	+0.7
3,180,671	-		ABZR87_RS15070	0.63	-2.1
3,180,714	+		ABZR87_RS15070	0.66	-0.2
3,180,733	+		ABZR87_RS15070	0.68	+0.0
3,180,734	-		ABZR87_RS15070	0.68	+0.2
3,180,820	+		ABZR87_RS15070	0.74	-1.0
3,180,820	+		ABZR87_RS15070	0.74	+0.1
3,180,821	-		ABZR87_RS15070	0.75	-0.6
3,180,821	-		ABZR87_RS15070	0.75	+0.5
3,180,841	+		ABZR87_RS15070	0.76	+0.0
3,180,841	+		ABZR87_RS15070	0.76	+0.7
3,180,842	-		ABZR87_RS15070	0.76	+2.1
3,180,842	-		ABZR87_RS15070	0.76	+0.9
3,180,883	+		ABZR87_RS15070	0.79	+0.2
3,180,884	-		ABZR87_RS15070	0.79	-1.5
3,180,940	+		ABZR87_RS15070	0.84	+0.2
3,180,940	+		ABZR87_RS15070	0.84	-2.6
3,180,940	+		ABZR87_RS15070	0.84	-0.0
3,180,941	-		ABZR87_RS15070	0.84	+0.5
3,180,941	-		ABZR87_RS15070	0.84	-1.3
3,180,941	-		ABZR87_RS15070	0.84	-0.1
3,180,955	+		ABZR87_RS15070	0.85	-0.2
3,180,955	+		ABZR87_RS15070	0.85	+0.1
3,181,040	+				-0.8
3,181,057	+				+0.7
3,181,132	+				-0.1
3,181,134	-				-0.5
3,181,135	+				-0.5
3,181,135	+				+0.8
3,181,136	-				-1.5
3,181,136	-				+0.4
3,181,136	-				+0.5
3,181,164	+				-0.8
3,181,164	+				+1.5
3,181,164	+				+2.0
3,181,164	+				-0.7
3,181,165	-				+0.1
3,181,165	-				-1.1
3,181,165	-				-0.4
3,181,168	+				+0.4
3,181,168	+				-1.2
3,181,169	-				-1.1
3,181,176	+				-0.1
3,181,185	+				-0.6
3,181,186	-				+0.6
3,181,186	-				-0.7
3,181,305	+		ABZR87_RS15075	0.40	+1.1
3,181,306	-		ABZR87_RS15075	0.40	+0.5
3,181,306	-		ABZR87_RS15075	0.40	+1.3
3,181,306	-		ABZR87_RS15075	0.40	-0.1
3,181,308	+		ABZR87_RS15075	0.41	+0.0
3,181,308	+		ABZR87_RS15075	0.41	+0.8
3,181,309	-		ABZR87_RS15075	0.41	+0.2
3,181,309	-		ABZR87_RS15075	0.41	+1.1
3,181,309	-		ABZR87_RS15075	0.41	-0.5
3,181,309	-		ABZR87_RS15075	0.41	+0.0
3,181,309	-		ABZR87_RS15075	0.41	-1.4
3,181,335	+		ABZR87_RS15075	0.49	+0.2
3,181,336	-		ABZR87_RS15075	0.49	-0.5
3,181,530	+				-0.7
3,181,659	+				+0.9
3,181,660	-				-0.4
3,181,833	-				+0.2
3,181,861	-				-0.7
3,181,991	+		ABZR87_RS15080	0.13	-0.0
3,181,991	+		ABZR87_RS15080	0.13	-0.0
3,181,991	+		ABZR87_RS15080	0.13	-0.6
3,181,991	+		ABZR87_RS15080	0.13	+0.1
3,181,992	-		ABZR87_RS15080	0.13	-1.9
3,181,992	-		ABZR87_RS15080	0.13	+2.7
3,181,992	-		ABZR87_RS15080	0.13	+0.3
3,181,992	-		ABZR87_RS15080	0.13	-2.4
3,181,992	-		ABZR87_RS15080	0.13	-0.4
3,181,992	-		ABZR87_RS15080	0.13	-1.4
3,182,003	+		ABZR87_RS15080	0.14	-0.3
3,182,003	+		ABZR87_RS15080	0.14	-0.5
3,182,072	+		ABZR87_RS15080	0.23	-0.8
3,182,072	+		ABZR87_RS15080	0.23	+1.1
3,182,072	+		ABZR87_RS15080	0.23	+0.0
3,182,073	-		ABZR87_RS15080	0.23	-1.1
3,182,089	+		ABZR87_RS15080	0.26	-0.4
3,182,090	-		ABZR87_RS15080	0.26	+0.1
3,182,090	-		ABZR87_RS15080	0.26	-1.2
3,182,090	-		ABZR87_RS15080	0.26	+0.7
3,182,090	-		ABZR87_RS15080	0.26	+1.1
3,182,090	-		ABZR87_RS15080	0.26	-1.0