Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS14185

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,995,180	+				+1.1
2,995,688	-		ABZR87_RS14180	0.12	+0.3
2,995,688	-		ABZR87_RS14180	0.12	+0.0
2,995,711	+		ABZR87_RS14180	0.17	+1.1
2,995,711	+		ABZR87_RS14180	0.17	+0.0
2,995,867	+		ABZR87_RS14180	0.47	-0.2
2,995,868	-		ABZR87_RS14180	0.47	+0.1
2,995,888	+		ABZR87_RS14180	0.51	-0.1
2,995,894	+		ABZR87_RS14180	0.53	-0.1
2,995,894	+		ABZR87_RS14180	0.53	-0.8
2,995,895	-		ABZR87_RS14180	0.53	-0.7
2,995,895	-		ABZR87_RS14180	0.53	-0.1
2,996,032	+		ABZR87_RS14180	0.80	+0.8
2,996,032	+		ABZR87_RS14180	0.80	+0.2
2,996,033	-		ABZR87_RS14180	0.80	-0.1
2,996,033	-		ABZR87_RS14180	0.80	-1.0
2,996,083	+		ABZR87_RS14180	0.90	-2.7
2,996,083	+		ABZR87_RS14180	0.90	-1.2
2,996,084	-		ABZR87_RS14180	0.90	+0.3
2,996,130	-				-0.1
2,996,130	-				+1.1
2,996,130	-				-0.3
2,996,155	+				-0.7
2,996,155	+				-1.4
2,996,155	+				-1.3
2,996,155	+				-0.1
2,996,156	-				-0.2
2,996,156	-				-2.0
2,996,156	-				-0.2
2,996,156	-				+0.6
2,996,276	+		ABZR87_RS14185	0.23	-2.1
2,996,537	+		ABZR87_RS14185	0.81	-0.6
2,996,537	+		ABZR87_RS14185	0.81	+0.3
2,996,538	-		ABZR87_RS14185	0.81	-1.4
2,996,713	-		ABZR87_RS14190	0.13	+0.6
2,996,713	-		ABZR87_RS14190	0.13	+1.0
2,996,832	+		ABZR87_RS14190	0.29	+1.6
2,996,832	+		ABZR87_RS14190	0.29	-0.1
2,996,833	-		ABZR87_RS14190	0.29	+0.5
2,996,833	-		ABZR87_RS14190	0.29	+1.2
2,996,833	-		ABZR87_RS14190	0.29	+0.6
2,996,833	-		ABZR87_RS14190	0.29	+0.7
2,996,833	-		ABZR87_RS14190	0.29	+0.7
2,996,843	+		ABZR87_RS14190	0.30	+0.5
2,996,844	-		ABZR87_RS14190	0.30	+0.6
2,996,844	-		ABZR87_RS14190	0.30	+1.1
2,997,063	+		ABZR87_RS14190	0.58	-0.2
2,997,063	+		ABZR87_RS14190	0.58	+0.2
2,997,063	+		ABZR87_RS14190	0.58	-0.2
2,997,063	+		ABZR87_RS14190	0.58	-1.0
2,997,063	+		ABZR87_RS14190	0.58	+1.1
2,997,064	-		ABZR87_RS14190	0.59	+0.9
2,997,064	-		ABZR87_RS14190	0.59	+1.6
2,997,163	+		ABZR87_RS14190	0.71	-0.5
2,997,164	-		ABZR87_RS14190	0.72	-1.5
2,997,164	-		ABZR87_RS14190	0.72	+0.0
2,997,164	-		ABZR87_RS14190	0.72	+0.7
2,997,169	+		ABZR87_RS14190	0.72	+0.1
2,997,169	+		ABZR87_RS14190	0.72	+0.3
2,997,170	-		ABZR87_RS14190	0.72	+1.1
2,997,170	-		ABZR87_RS14190	0.72	+0.7
2,997,170	-		ABZR87_RS14190	0.72	+0.6
2,997,170	-		ABZR87_RS14190	0.72	-0.4
2,997,170	-		ABZR87_RS14190	0.72	-0.2
2,997,170	-		ABZR87_RS14190	0.72	-0.8
2,997,170	-		ABZR87_RS14190	0.72	-1.3
2,997,170	-		ABZR87_RS14190	0.72	+0.3
2,997,491	-				-0.8