Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13425

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,842,178	-		ABZR87_RS13420	0.53	-0.2
2,842,188	+		ABZR87_RS13420	0.54	-0.2
2,842,188	+		ABZR87_RS13420	0.54	-0.1
2,842,188	+		ABZR87_RS13420	0.54	+1.8
2,842,189	-		ABZR87_RS13420	0.54	-0.2
2,842,207	+		ABZR87_RS13420	0.56	-0.9
2,842,787	-				+0.2
2,842,803	+				+0.3
2,842,816	+				-0.7
2,842,816	+				+0.7
2,842,838	+				-0.3
2,842,839	-				-0.6
2,842,915	+				-1.2
2,842,916	-				+0.7
2,842,916	-				-2.6
2,842,994	+				+1.1
2,842,995	-				+0.2
2,843,035	+				+0.5
2,843,035	+				-1.0
2,843,036	-				-0.3
2,843,036	-				-0.1
2,843,036	-				-0.6
2,843,036	-				+0.1
2,843,076	+				-0.5
2,843,077	-				-0.0
2,843,077	-				+2.7
2,843,077	-				-0.2
2,843,088	+				-0.5
2,843,089	-				-0.5
2,843,250	+		ABZR87_RS13425	0.11	-0.3
2,843,251	-		ABZR87_RS13425	0.11	+0.1
2,843,251	-		ABZR87_RS13425	0.11	-0.7
2,843,350	+		ABZR87_RS13425	0.25	-1.3
2,843,350	+		ABZR87_RS13425	0.25	-1.7
2,843,350	+		ABZR87_RS13425	0.25	-0.5
2,843,350	+		ABZR87_RS13425	0.25	+0.1
2,843,351	-		ABZR87_RS13425	0.25	+0.4
2,843,604	+		ABZR87_RS13425	0.61	+1.1
2,843,604	+		ABZR87_RS13425	0.61	-0.4
2,843,605	-		ABZR87_RS13425	0.61	-1.0
2,843,605	-		ABZR87_RS13425	0.61	-0.2
2,843,610	+		ABZR87_RS13425	0.62	-0.0
2,843,610	+		ABZR87_RS13425	0.62	-1.4
2,843,610	+		ABZR87_RS13425	0.62	-0.5
2,843,611	-		ABZR87_RS13425	0.62	-0.9
2,843,611	-		ABZR87_RS13425	0.62	-0.7
2,843,649	+		ABZR87_RS13425	0.68	+0.3
2,843,650	-		ABZR87_RS13425	0.68	-0.7
2,843,650	-		ABZR87_RS13425	0.68	-0.3
2,843,703	+		ABZR87_RS13425	0.75	-0.2
2,843,703	+		ABZR87_RS13425	0.75	+0.7
2,843,704	-		ABZR87_RS13425	0.75	+0.6
2,843,704	-		ABZR87_RS13425	0.75	-0.3
2,843,704	-		ABZR87_RS13425	0.75	+1.7
2,843,722	+		ABZR87_RS13425	0.78	-0.7
2,843,722	+		ABZR87_RS13425	0.78	-0.2
2,843,722	+		ABZR87_RS13425	0.78	-0.5
2,843,722	+		ABZR87_RS13425	0.78	-0.7
2,843,723	-		ABZR87_RS13425	0.78	+0.2
2,843,723	-		ABZR87_RS13425	0.78	-0.3
2,843,725	+		ABZR87_RS13425	0.78	-1.2
2,843,725	+		ABZR87_RS13425	0.78	-0.4
2,843,725	+		ABZR87_RS13425	0.78	+0.1
2,843,725	+		ABZR87_RS13425	0.78	+1.5
2,843,905	+				-0.1
2,843,905	+				+2.4
2,843,906	-				-0.1
2,843,906	-				+0.7
2,843,982	+		ABZR87_RS13430	0.20	-0.7
2,843,983	-		ABZR87_RS13430	0.20	-0.6
2,843,983	-		ABZR87_RS13430	0.20	+1.1
2,844,049	-		ABZR87_RS13430	0.35	-1.6
2,844,126	+		ABZR87_RS13430	0.52	-0.7
2,844,127	-		ABZR87_RS13430	0.52	-0.1
2,844,127	-		ABZR87_RS13430	0.52	-0.2
2,844,127	-		ABZR87_RS13430	0.52	+0.6
2,844,202	-		ABZR87_RS13430	0.69	+0.1
2,844,225	+		ABZR87_RS13430	0.75	+0.5
2,844,225	+		ABZR87_RS13430	0.75	+0.8
2,844,225	+		ABZR87_RS13430	0.75	-0.4
2,844,225	+		ABZR87_RS13430	0.75	-1.2
2,844,225	+		ABZR87_RS13430	0.75	-0.6
2,844,226	-		ABZR87_RS13430	0.75	-0.0
2,844,231	+		ABZR87_RS13430	0.76	+0.1
2,844,231	+		ABZR87_RS13430	0.76	+1.0
2,844,231	+		ABZR87_RS13430	0.76	+0.1
2,844,231	+		ABZR87_RS13430	0.76	-1.6
2,844,231	+		ABZR87_RS13430	0.76	-1.4
2,844,232	-		ABZR87_RS13430	0.76	-1.9
2,844,232	-		ABZR87_RS13430	0.76	-0.7
2,844,232	-		ABZR87_RS13430	0.76	-0.9
2,844,234	+		ABZR87_RS13430	0.77	+0.9
2,844,234	+		ABZR87_RS13430	0.77	+0.3
2,844,235	-		ABZR87_RS13430	0.77	+1.1
2,844,235	-		ABZR87_RS13430	0.77	+1.1
2,844,259	-		ABZR87_RS13430	0.82	+1.1
2,844,374	+				+0.7
2,844,375	-				+0.7
2,844,517	+		ABZR87_RS13435	0.13	-0.6
2,844,518	-		ABZR87_RS13435	0.13	+0.7
2,844,518	-		ABZR87_RS13435	0.13	+0.1
2,844,518	-		ABZR87_RS13435	0.13	-1.2
2,844,518	-		ABZR87_RS13435	0.13	-2.7
2,844,518	-		ABZR87_RS13435	0.13	-0.5