Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13120

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,781,586	-				-0.8
2,781,586	-				-1.2
2,781,586	-				+0.5
2,781,597	-				+0.3
2,781,607	+				-0.5
2,781,607	+				+0.2
2,781,607	+				-0.9
2,781,607	+				-0.3
2,781,607	+				-0.3
2,781,608	-				+0.2
2,781,608	-				+0.4
2,781,608	-				-0.1
2,781,658	+				-0.4
2,781,659	-				+0.2
2,781,659	-				-0.5
2,781,696	+				-0.0
2,781,697	-				-3.1
2,781,697	-				-0.6
2,781,697	-				+0.4
2,781,697	-				+0.1
2,781,702	+				+0.2
2,781,829	+		ABZR87_RS13110	0.47	-0.3
2,781,829	+		ABZR87_RS13110	0.47	+0.5
2,781,830	-		ABZR87_RS13110	0.47	+0.8
2,781,860	+		ABZR87_RS13110	0.58	-0.3
2,781,861	-		ABZR87_RS13110	0.58	+0.5
2,781,861	-		ABZR87_RS13110	0.58	+0.1
2,781,985	+				-0.1
2,781,985	+				+0.2
2,781,985	+				-0.2
2,782,008	+				+0.1
2,782,175	+		ABZR87_RS13115	0.37	-0.6
2,782,175	+		ABZR87_RS13115	0.37	-0.7
2,782,175	+		ABZR87_RS13115	0.37	-0.0
2,782,175	+		ABZR87_RS13115	0.37	-0.3
2,782,175	+		ABZR87_RS13115	0.37	-0.2
2,782,176	-		ABZR87_RS13115	0.37	+0.3
2,782,176	-		ABZR87_RS13115	0.37	+0.8
2,782,176	-		ABZR87_RS13115	0.37	-0.9
2,782,191	+		ABZR87_RS13115	0.41	+0.3
2,782,191	+		ABZR87_RS13115	0.41	+0.3
2,782,191	+		ABZR87_RS13115	0.41	-0.1
2,782,247	+		ABZR87_RS13115	0.53	+0.5
2,782,248	-		ABZR87_RS13115	0.53	+0.5
2,782,248	-		ABZR87_RS13115	0.53	-0.3
2,782,277	-		ABZR87_RS13115	0.60	-2.1
2,782,277	-		ABZR87_RS13115	0.60	+0.6
2,782,380	+		ABZR87_RS13115	0.82	+0.3
2,782,381	-		ABZR87_RS13115	0.83	+1.3
2,782,416	+				-0.3
2,782,417	-				-0.6
2,782,417	-				-0.8
2,782,417	-				-0.1
2,782,417	-				+0.0
2,782,438	+				-0.5
2,782,438	+				-0.9
2,782,438	+				-0.8
2,782,546	+				-0.6
2,782,547	-				+0.0
2,782,547	-				-1.1
2,782,553	+				+0.3
2,782,553	+				+0.7
2,782,553	+				-1.0
2,782,553	+				-1.4
2,782,553	+				+0.4
2,782,553	+				-0.5
2,782,554	-				+0.4
2,782,554	-				+0.7
2,782,554	-				+0.7
2,782,554	-				+0.3
2,782,796	+		ABZR87_RS13120	0.57	-1.8
2,782,796	+		ABZR87_RS13120	0.57	-2.9
2,782,796	+		ABZR87_RS13120	0.57	-1.7
2,782,796	+		ABZR87_RS13120	0.57	-0.7
2,782,796	+		ABZR87_RS13120	0.57	-2.6
2,782,796	+		ABZR87_RS13120	0.57	+1.1
2,782,796	+		ABZR87_RS13120	0.57	-1.7
2,782,797	-		ABZR87_RS13120	0.57	+1.2
2,782,817	-		ABZR87_RS13120	0.62	+1.1
2,782,835	+		ABZR87_RS13120	0.66	-1.9
2,782,836	-		ABZR87_RS13120	0.66	-0.8
2,782,836	-		ABZR87_RS13120	0.66	+0.6
2,782,836	-		ABZR87_RS13120	0.66	+1.4
2,782,923	+		ABZR87_RS13120	0.86	-1.7
2,782,923	+		ABZR87_RS13120	0.86	+2.1
2,782,923	+		ABZR87_RS13120	0.86	-3.5
2,782,963	+				-2.8
2,783,046	-				-0.2
2,783,068	+				-1.8
2,783,068	+				-1.3
2,783,068	+				-1.3
2,783,069	-				-1.7
2,783,069	-				-0.7
2,783,069	-				+1.2
2,783,069	-				-0.8
2,783,070	+				-1.9
2,783,071	-				-0.2
2,783,141	+				-2.8
2,783,141	+				-2.1
2,783,141	+				-2.6
2,783,141	+				+0.1
2,783,141	+				-1.0
2,783,141	+				-2.2
2,783,141	+				-3.6
2,783,142	-				-0.2
2,783,142	-				-0.3
2,783,142	-				-0.8
2,783,142	-				+1.1
2,783,142	-				+0.9
2,783,142	-				-0.4
2,783,142	-				-0.9
2,783,142	-				-0.2
2,783,142	-				-0.3
2,783,143	+				-2.1
2,783,143	+				-1.6
2,783,269	+				-1.9
2,783,269	+				-1.9
2,783,269	+				-2.3
2,783,269	+				-1.8
2,783,269	+				-2.0
2,783,270	-				-0.6
2,783,270	-				-0.3
2,783,270	-				-0.3
2,783,397	+		ABZR87_RS13125	0.26	-1.2
2,783,397	+		ABZR87_RS13125	0.26	-1.2
2,783,397	+		ABZR87_RS13125	0.26	-1.7
2,783,398	-		ABZR87_RS13125	0.27	+0.2
2,783,398	-		ABZR87_RS13125	0.27	+0.5
2,783,398	-		ABZR87_RS13125	0.27	+0.6
2,783,470	-		ABZR87_RS13125	0.51	-0.2
2,783,491	+		ABZR87_RS13125	0.58	-3.2
2,783,512	+		ABZR87_RS13125	0.65	-2.2
2,783,512	+		ABZR87_RS13125	0.65	-0.4
2,783,512	+		ABZR87_RS13125	0.65	-0.7
2,783,512	+		ABZR87_RS13125	0.65	-2.2
2,783,512	+		ABZR87_RS13125	0.65	-1.5
2,783,513	-		ABZR87_RS13125	0.66	+1.0
2,783,691	+		ABZR87_RS13130	0.33	-1.2
2,783,691	+		ABZR87_RS13130	0.33	-2.3
2,783,691	+		ABZR87_RS13130	0.33	-2.5
2,783,721	+		ABZR87_RS13130	0.45	-2.7
2,783,721	+		ABZR87_RS13130	0.45	-2.9
2,783,722	-		ABZR87_RS13130	0.45	+0.1
2,783,723	+		ABZR87_RS13130	0.45	-2.0
2,783,724	-		ABZR87_RS13130	0.46	-1.7
2,783,857	-				-0.3
2,783,877	-				-0.3
2,783,877	-				+0.1