Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12905

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,745,324	+		ABZR87_RS12900	0.37	-1.5
2,745,325	-		ABZR87_RS12900	0.37	+0.2
2,745,337	+		ABZR87_RS12900	0.38	-1.8
2,745,406	+		ABZR87_RS12900	0.43	-0.1
2,745,406	+		ABZR87_RS12900	0.43	+0.1
2,745,406	+		ABZR87_RS12900	0.43	+0.2
2,745,406	+		ABZR87_RS12900	0.43	-1.9
2,745,407	-		ABZR87_RS12900	0.43	-2.2
2,745,407	-		ABZR87_RS12900	0.43	-1.2
2,745,407	-		ABZR87_RS12900	0.43	+0.1
2,745,409	-		ABZR87_RS12900	0.43	+0.9
2,745,460	+		ABZR87_RS12900	0.47	+0.5
2,745,461	-		ABZR87_RS12900	0.47	+1.4
2,745,526	+		ABZR87_RS12900	0.52	-0.4
2,745,526	+		ABZR87_RS12900	0.52	+0.7
2,745,527	-		ABZR87_RS12900	0.52	+2.3
2,745,527	-		ABZR87_RS12900	0.52	-0.6
2,745,527	-		ABZR87_RS12900	0.52	-0.5
2,745,634	+		ABZR87_RS12900	0.60	-0.1
2,745,634	+		ABZR87_RS12900	0.60	-0.6
2,745,634	+		ABZR87_RS12900	0.60	-0.8
2,745,635	-		ABZR87_RS12900	0.60	+0.3
2,745,635	-		ABZR87_RS12900	0.60	+0.1
2,745,635	-		ABZR87_RS12900	0.60	-0.6
2,745,635	-		ABZR87_RS12900	0.60	-0.7
2,745,753	+		ABZR87_RS12900	0.69	-1.6
2,745,753	+		ABZR87_RS12900	0.69	-2.2
2,745,754	-		ABZR87_RS12900	0.69	-1.5
2,745,922	+		ABZR87_RS12900	0.82	+0.2
2,745,922	+		ABZR87_RS12900	0.82	-1.0
2,745,922	+		ABZR87_RS12900	0.82	+0.0
2,745,923	-		ABZR87_RS12900	0.82	-0.0
2,745,923	-		ABZR87_RS12900	0.82	-1.8
2,745,952	-		ABZR87_RS12900	0.84	-1.0
2,745,952	-		ABZR87_RS12900	0.84	+0.1
2,745,952	-		ABZR87_RS12900	0.84	+0.1
2,745,976	-		ABZR87_RS12900	0.86	+0.8
2,746,043	+				-0.4
2,746,084	+				-0.4
2,746,084	+				-0.3
2,746,084	+				+0.1
2,746,084	+				+0.2
2,746,085	-				+1.1
2,746,131	+				+0.1
2,746,131	+				-0.4
2,746,132	-				+1.4
2,746,156	+				+0.1
2,746,157	-				-0.6
2,746,157	-				-0.1
2,746,182	+				-0.3
2,746,182	+				+0.1
2,746,249	+				+0.2
2,746,249	+				+0.8
2,746,249	+				-0.1
2,746,316	+		ABZR87_RS12905	0.12	-1.3
2,746,317	-		ABZR87_RS12905	0.13	-0.2
2,746,317	-		ABZR87_RS12905	0.13	-2.3
2,746,317	-		ABZR87_RS12905	0.13	-0.2
2,746,317	-		ABZR87_RS12905	0.13	+2.1
2,746,317	-		ABZR87_RS12905	0.13	-0.4
2,746,354	+		ABZR87_RS12905	0.32	-1.3
2,746,509	-				-0.2
2,746,688	-				-0.7
2,746,839	+				-0.4
2,746,876	+				+0.6
2,746,876	+				-0.4
2,746,876	+				-0.8
2,746,877	-				-0.7
2,746,877	-				+0.6
2,746,911	+				+0.5
2,746,912	-				+0.8
2,746,921	+				-2.0
2,746,963	+				-0.4
2,746,993	+				+0.5
2,746,994	-				-0.2
2,747,080	+				-0.9
2,747,081	-				+0.2
2,747,086	-				+0.5
2,747,101	-				-0.7
2,747,108	+				-1.6
2,747,138	+				-0.4
2,747,139	-				-0.7
2,747,188	+				-0.2
2,747,188	+				-1.7
2,747,189	-				-1.2
2,747,189	-				+1.2
2,747,201	+				-1.6
2,747,202	-				-0.2
2,747,219	+				-0.6
2,747,220	-				-0.8
2,747,298	-				-1.0
2,747,432	+		ABZR87_RS12910	0.13	-0.5
2,747,432	+		ABZR87_RS12910	0.13	+0.1
2,747,460	+		ABZR87_RS12910	0.16	-0.8
2,747,460	+		ABZR87_RS12910	0.16	-0.4
2,747,461	-		ABZR87_RS12910	0.16	-0.4
2,747,461	-		ABZR87_RS12910	0.16	+1.6
2,747,461	-		ABZR87_RS12910	0.16	+1.6
2,747,461	-		ABZR87_RS12910	0.16	+0.3
2,747,461	-		ABZR87_RS12910	0.16	-1.2