Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12295

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,608,582	+				-0.7
2,608,582	+				-0.4
2,608,592	-				+0.5
2,608,592	-				+0.3
2,608,592	-				+2.7
2,608,690	+		ABZR87_RS12290	0.16	+0.3
2,608,691	-		ABZR87_RS12290	0.16	-0.8
2,608,691	-		ABZR87_RS12290	0.16	+0.2
2,608,691	-		ABZR87_RS12290	0.16	-0.2
2,608,691	-		ABZR87_RS12290	0.16	+0.2
2,608,852	+		ABZR87_RS12290	0.34	-0.1
2,608,852	+		ABZR87_RS12290	0.34	-0.3
2,608,876	+		ABZR87_RS12290	0.36	+0.6
2,608,876	+		ABZR87_RS12290	0.36	+0.3
2,609,111	-		ABZR87_RS12290	0.62	-0.2
2,609,111	-		ABZR87_RS12290	0.62	+1.3
2,609,153	-		ABZR87_RS12290	0.67	-1.8
2,609,153	-		ABZR87_RS12290	0.67	+0.0
2,609,434	+				-1.2
2,609,435	-				+0.2
2,609,521	+				-0.8
2,609,521	+				-0.1
2,609,522	-				-0.6
2,609,541	+				-0.2
2,609,730	+		ABZR87_RS12295	0.15	-0.3
2,610,100	+		ABZR87_RS12295	0.48	-0.1
2,610,100	+		ABZR87_RS12295	0.48	+0.2
2,610,100	+		ABZR87_RS12295	0.48	+0.2
2,610,101	-		ABZR87_RS12295	0.48	-1.6
2,610,101	-		ABZR87_RS12295	0.48	-0.5
2,610,101	-		ABZR87_RS12295	0.48	-0.4
2,610,101	-		ABZR87_RS12295	0.48	+1.2
2,610,101	-		ABZR87_RS12295	0.48	-1.2
2,610,101	-		ABZR87_RS12295	0.48	-0.1
2,610,448	-		ABZR87_RS12295	0.79	-0.5
2,610,676	-				+2.0
2,610,676	-				-0.9
2,610,797	+		ABZR87_RS12300	0.30	-0.5
2,610,798	-		ABZR87_RS12300	0.30	+0.2
2,610,798	-		ABZR87_RS12300	0.30	-0.9
2,610,875	+		ABZR87_RS12300	0.57	+0.2
2,610,935	+		ABZR87_RS12300	0.77	+0.2
2,610,935	+		ABZR87_RS12300	0.77	+1.7
2,610,935	+		ABZR87_RS12300	0.77	+0.0
2,611,057	+				+0.3
2,611,058	-				-0.8
2,611,290	+		ABZR87_RS12305	0.26	+0.3
2,611,291	-		ABZR87_RS12305	0.26	+0.9
2,611,291	-		ABZR87_RS12305	0.26	+0.5
2,611,371	+		ABZR87_RS12305	0.35	-0.5
2,611,371	+		ABZR87_RS12305	0.35	-0.2
2,611,372	-		ABZR87_RS12305	0.35	-0.8
2,611,372	-		ABZR87_RS12305	0.35	-0.2
2,611,372	-		ABZR87_RS12305	0.35	+0.8
2,611,372	-		ABZR87_RS12305	0.35	-1.6
2,611,533	+		ABZR87_RS12305	0.52	-2.3