Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS12100

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,566,706	+		ABZR87_RS12090	0.73	+0.1
2,566,823	+				+0.4
2,566,823	+				-0.2
2,566,886	-				+0.6
2,567,490	+		ABZR87_RS12095	0.80	-0.4
2,567,490	+		ABZR87_RS12095	0.80	-0.3
2,567,491	-		ABZR87_RS12095	0.80	-0.5
2,567,491	-		ABZR87_RS12095	0.80	-0.1
2,567,491	-		ABZR87_RS12095	0.80	-0.3
2,567,491	-		ABZR87_RS12095	0.80	-0.2
2,567,562	+				-1.4
2,567,564	+				-0.4
2,567,564	+				-0.8
2,567,564	+				-1.5
2,567,565	-				-2.6
2,567,565	-				-0.2
2,567,565	-				+0.3
2,567,587	-				+0.6
2,567,634	+				+0.6
2,567,634	+				-0.4
2,567,973	+		ABZR87_RS12100	0.49	+1.0
2,567,974	-		ABZR87_RS12100	0.49	+0.6
2,567,974	-		ABZR87_RS12100	0.49	-2.0
2,568,162	+		ABZR87_RS12100	0.76	+0.7
2,568,162	+		ABZR87_RS12100	0.76	+0.3
2,568,283	-				-0.4
2,568,306	+				+0.4
2,568,306	+				-0.7
2,568,307	-				-0.3
2,568,312	+				-0.2
2,568,312	+				-0.1
2,568,312	+				-0.0
2,568,312	+				-0.9
2,568,313	-				+0.3
2,568,313	-				-0.0
2,568,313	-				+0.4
2,568,313	-				-0.5
2,568,313	-				-0.0
2,568,430	+				-1.3
2,568,431	-				-1.1
2,568,506	-		ABZR87_RS12105	0.17	+0.7
2,568,515	+		ABZR87_RS12105	0.18	+0.4
2,568,721	+		ABZR87_RS12105	0.42	-0.2
2,568,721	+		ABZR87_RS12105	0.42	-1.0
2,568,721	+		ABZR87_RS12105	0.42	-1.0
2,568,721	+		ABZR87_RS12105	0.42	+0.4
2,568,721	+		ABZR87_RS12105	0.42	-1.1
2,568,722	-		ABZR87_RS12105	0.42	+0.0
2,568,722	-		ABZR87_RS12105	0.42	+1.7
2,568,722	-		ABZR87_RS12105	0.42	-0.1
2,568,857	-		ABZR87_RS12105	0.57	-0.2
2,568,866	+		ABZR87_RS12105	0.58	-0.2
2,568,962	-		ABZR87_RS12105	0.69	-0.4
2,568,962	-		ABZR87_RS12105	0.69	-2.4
2,568,962	-		ABZR87_RS12105	0.69	-0.9
2,568,962	-		ABZR87_RS12105	0.69	+2.0
2,568,962	-		ABZR87_RS12105	0.69	-1.0
2,568,964	+		ABZR87_RS12105	0.69	-0.8
2,568,965	-		ABZR87_RS12105	0.69	-0.5
2,568,965	-		ABZR87_RS12105	0.69	+0.7
2,568,988	+		ABZR87_RS12105	0.72	-0.1
2,569,141	+		ABZR87_RS12105	0.89	+0.8
2,569,142	-		ABZR87_RS12105	0.89	+0.4
2,569,278	+				+0.7
2,569,280	-				+0.4
2,569,280	-				+0.8
2,569,320	+				-0.6