Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS11005

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,330,013	+		ABZR87_RS11000	0.16	-0.7
2,330,192	+		ABZR87_RS11000	0.34	-0.3
2,330,192	+		ABZR87_RS11000	0.34	+1.4
2,330,192	+		ABZR87_RS11000	0.34	-2.6
2,330,193	-		ABZR87_RS11000	0.35	+1.1
2,330,195	+		ABZR87_RS11000	0.35	+0.5
2,330,196	-		ABZR87_RS11000	0.35	-1.3
2,330,196	-		ABZR87_RS11000	0.35	+0.5
2,330,196	-		ABZR87_RS11000	0.35	+1.7
2,330,196	-		ABZR87_RS11000	0.35	+1.3
2,330,201	+		ABZR87_RS11000	0.35	-0.8
2,330,201	+		ABZR87_RS11000	0.35	-0.8
2,330,201	+		ABZR87_RS11000	0.35	+0.7
2,330,201	+		ABZR87_RS11000	0.35	+0.6
2,330,201	+		ABZR87_RS11000	0.35	-0.1
2,330,201	+		ABZR87_RS11000	0.35	+1.0
2,330,202	-		ABZR87_RS11000	0.36	+0.8
2,330,202	-		ABZR87_RS11000	0.36	+0.5
2,330,294	+		ABZR87_RS11000	0.45	+0.1
2,330,294	+		ABZR87_RS11000	0.45	+0.2
2,330,294	+		ABZR87_RS11000	0.45	-0.7
2,330,295	-		ABZR87_RS11000	0.45	-1.0
2,330,295	-		ABZR87_RS11000	0.45	-0.2
2,330,486	+		ABZR87_RS11000	0.65	+0.5
2,330,744	+				-0.3
2,330,833	+				-0.1
2,330,834	-				-2.4
2,330,879	+				-1.1
2,330,879	+				+0.8
2,330,921	+				-0.9
2,330,921	+				-0.3
2,330,932	+				+2.7
2,330,933	-				+0.1
2,330,933	-				+1.4
2,331,709	+				+1.4
2,331,710	-				-1.7
2,331,786	+				-1.1
2,331,787	-				+1.2
2,331,792	+				-0.3
2,331,824	+				-0.2
2,331,824	+				+0.1
2,331,860	+		ABZR87_RS11010	0.21	+2.5
2,331,861	-		ABZR87_RS11010	0.21	+2.3
2,331,861	-		ABZR87_RS11010	0.21	+1.6
2,331,885	-		ABZR87_RS11010	0.30	+0.6
2,332,132	-				+1.4
2,332,137	-				+0.3
2,332,137	-				-0.9
2,332,161	+				+1.9
2,332,186	+				+1.1
2,332,228	+				-3.3
2,332,228	+				+0.2
2,332,451	-		ABZR87_RS11015	0.19	-2.5
2,332,456	+		ABZR87_RS11015	0.19	-2.2
2,332,456	+		ABZR87_RS11015	0.19	-2.8
2,332,624	+		ABZR87_RS11015	0.31	-1.5
2,332,624	+		ABZR87_RS11015	0.31	-0.3
2,332,625	-		ABZR87_RS11015	0.31	-0.6
2,332,625	-		ABZR87_RS11015	0.31	-1.9