Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10950

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,318,241	+		ABZR87_RS10945	0.25	-1.2
2,318,242	-		ABZR87_RS10945	0.25	-1.4
2,318,242	-		ABZR87_RS10945	0.25	-0.1
2,318,242	-		ABZR87_RS10945	0.25	-1.5
2,318,258	-		ABZR87_RS10945	0.26	-3.5
2,318,258	-		ABZR87_RS10945	0.26	-1.3
2,318,258	-		ABZR87_RS10945	0.26	-1.9
2,318,555	+		ABZR87_RS10945	0.50	-2.2
2,318,555	+		ABZR87_RS10945	0.50	+0.4
2,318,555	+		ABZR87_RS10945	0.50	-1.3
2,318,556	-		ABZR87_RS10945	0.50	-2.9
2,318,557	+		ABZR87_RS10945	0.50	-2.3
2,318,557	+		ABZR87_RS10945	0.50	-0.5
2,318,557	+		ABZR87_RS10945	0.50	-0.2
2,318,558	-		ABZR87_RS10945	0.50	-0.2
2,318,558	-		ABZR87_RS10945	0.50	+0.9
2,318,558	-		ABZR87_RS10945	0.50	-1.4
2,318,610	-		ABZR87_RS10945	0.54	-1.1
2,318,610	-		ABZR87_RS10945	0.54	+0.5
2,318,661	-		ABZR87_RS10945	0.58	-2.4
2,318,695	+		ABZR87_RS10945	0.61	+0.7
2,319,185	+				-0.9
2,319,185	+				-1.1
2,319,185	+				-2.4
2,319,186	-				+0.7
2,319,186	-				+0.4
2,319,186	-				+0.8
2,319,186	-				-0.5
2,319,198	+				+0.4
2,319,198	+				-1.0
2,319,199	-				-1.1
2,319,666	+		ABZR87_RS10950	0.31	-0.7
2,319,666	+		ABZR87_RS10950	0.31	-0.2
2,319,667	-		ABZR87_RS10950	0.31	+0.1
2,319,667	-		ABZR87_RS10950	0.31	-1.1
2,319,667	-		ABZR87_RS10950	0.31	+1.7
2,319,683	+		ABZR87_RS10950	0.32	-0.3
2,319,852	+		ABZR87_RS10950	0.44	-1.4
2,319,852	+		ABZR87_RS10950	0.44	-0.1
2,319,852	+		ABZR87_RS10950	0.44	+0.5
2,319,852	+		ABZR87_RS10950	0.44	+1.9
2,319,852	+		ABZR87_RS10950	0.44	-0.6
2,319,853	-		ABZR87_RS10950	0.45	-0.0
2,319,853	-		ABZR87_RS10950	0.45	-0.1
2,319,853	-		ABZR87_RS10950	0.45	-0.4
2,319,876	+		ABZR87_RS10950	0.46	-0.6
2,319,876	+		ABZR87_RS10950	0.46	+3.3
2,319,877	-		ABZR87_RS10950	0.46	-1.2
2,319,877	-		ABZR87_RS10950	0.46	+0.5
2,319,885	+		ABZR87_RS10950	0.47	-0.2
2,319,886	-		ABZR87_RS10950	0.47	-0.6
2,319,893	+		ABZR87_RS10950	0.47	-2.3
2,319,988	-		ABZR87_RS10950	0.54	+0.3
2,319,988	-		ABZR87_RS10950	0.54	-2.0
2,320,051	-		ABZR87_RS10950	0.59	+1.7
2,320,182	+		ABZR87_RS10950	0.68	-1.3
2,320,214	+		ABZR87_RS10950	0.71	-0.3
2,320,248	+		ABZR87_RS10950	0.73	+1.0
2,320,249	-		ABZR87_RS10950	0.73	-2.4
2,320,249	-		ABZR87_RS10950	0.73	-1.9
2,320,351	-		ABZR87_RS10950	0.81	+0.6
2,320,351	-		ABZR87_RS10950	0.81	+1.0
2,320,374	+		ABZR87_RS10950	0.82	-1.1
2,320,374	+		ABZR87_RS10950	0.82	-1.2
2,320,374	+		ABZR87_RS10950	0.82	-0.6
2,320,375	-		ABZR87_RS10950	0.82	+0.1
2,320,375	-		ABZR87_RS10950	0.82	-0.4
2,320,426	-		ABZR87_RS10950	0.86	+0.0
2,320,529	-				+2.7
2,320,629	-				+3.7
2,320,629	-				+0.9
2,320,629	-				+0.4
2,320,693	+				+1.7
2,320,693	+				+0.7
2,320,694	-				+0.7
2,320,694	-				+0.4
2,320,716	+				+1.1
2,320,717	-				+0.1
2,320,818	-		ABZR87_RS10955	0.21	+1.1
2,320,933	-		ABZR87_RS10955	0.33	+0.2
2,320,933	-		ABZR87_RS10955	0.33	+2.7
2,320,933	-		ABZR87_RS10955	0.33	+0.8
2,320,933	-		ABZR87_RS10955	0.33	+0.8
2,321,091	+		ABZR87_RS10955	0.50	+0.1
2,321,092	-		ABZR87_RS10955	0.51	+1.1
2,321,092	-		ABZR87_RS10955	0.51	-0.0
2,321,092	-		ABZR87_RS10955	0.51	+0.4
2,321,092	-		ABZR87_RS10955	0.51	+0.7
2,321,110	+		ABZR87_RS10955	0.53	-0.8
2,321,172	+		ABZR87_RS10955	0.59	+2.2
2,321,173	-		ABZR87_RS10955	0.59	-1.4
2,321,195	+		ABZR87_RS10955	0.62	-0.9
2,321,195	+		ABZR87_RS10955	0.62	-0.7
2,321,296	-		ABZR87_RS10955	0.73	+0.6
2,321,345	+		ABZR87_RS10955	0.78	+1.4
2,321,345	+		ABZR87_RS10955	0.78	+1.9
2,321,345	+		ABZR87_RS10955	0.78	+0.4
2,321,346	-		ABZR87_RS10955	0.78	+0.5
2,321,346	-		ABZR87_RS10955	0.78	-0.8
2,321,346	-		ABZR87_RS10955	0.78	-0.2
2,321,349	+		ABZR87_RS10955	0.79	+1.7
2,321,349	+		ABZR87_RS10955	0.79	+1.4
2,321,350	-		ABZR87_RS10955	0.79	-1.0
2,321,409	+		ABZR87_RS10955	0.85	-0.5
2,321,475	+				+0.8
2,321,475	+				+0.7
2,321,476	-				+0.8
2,321,476	-				+1.4
2,321,476	-				+1.2
2,321,541	+				+0.1
2,321,541	+				-0.5
2,321,542	-				-0.3
2,321,542	-				+0.0
2,321,544	+				-0.5
2,321,544	+				-1.2
2,321,544	+				+0.5
2,321,545	-				-0.4
2,321,545	-				-1.1