Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10850

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,296,982	+		ABZR87_RS10840	0.80	-0.2
2,297,168	+				+0.2
2,297,168	+				+0.4
2,297,214	-				+0.3
2,297,397	+		ABZR87_RS10845	0.26	-0.2
2,297,397	+		ABZR87_RS10845	0.26	-0.2
2,297,397	+		ABZR87_RS10845	0.26	-0.1
2,297,397	+		ABZR87_RS10845	0.26	+0.1
2,297,397	+		ABZR87_RS10845	0.26	-0.8
2,297,397	+		ABZR87_RS10845	0.26	-0.1
2,297,397	+		ABZR87_RS10845	0.26	+0.2
2,297,397	+		ABZR87_RS10845	0.26	+0.6
2,297,398	-		ABZR87_RS10845	0.26	+1.7
2,297,398	-		ABZR87_RS10845	0.26	-0.6
2,297,398	-		ABZR87_RS10845	0.26	-0.4
2,297,403	+		ABZR87_RS10845	0.27	-0.5
2,297,404	-		ABZR87_RS10845	0.27	+2.7
2,297,460	+		ABZR87_RS10845	0.36	+2.1
2,297,460	+		ABZR87_RS10845	0.36	-0.3
2,297,460	+		ABZR87_RS10845	0.36	+0.3
2,297,460	+		ABZR87_RS10845	0.36	+0.1
2,297,527	-		ABZR87_RS10845	0.47	-1.2
2,297,752	-		ABZR87_RS10845	0.83	-0.1
2,297,832	+				+0.6
2,297,843	-				+0.1
2,297,959	+				-0.8
2,297,959	+				-0.5
2,297,959	+				-0.9
2,297,959	+				+0.4
2,297,959	+				-0.3
2,297,959	+				-0.8
2,297,960	-				-0.0
2,297,960	-				-1.7
2,297,960	-				+1.4
2,297,960	-				-0.7
2,297,960	-				-0.2
2,297,998	+				+0.1
2,297,999	-				+0.8
2,298,089	+		ABZR87_RS10850	0.12	+0.1
2,298,089	+		ABZR87_RS10850	0.12	-0.1
2,298,089	+		ABZR87_RS10850	0.12	+0.2
2,298,090	-		ABZR87_RS10850	0.12	+0.2
2,298,090	-		ABZR87_RS10850	0.12	+1.9
2,298,090	-		ABZR87_RS10850	0.12	-1.7
2,298,090	-		ABZR87_RS10850	0.12	+0.1
2,298,090	-		ABZR87_RS10850	0.12	+0.3
2,298,090	-		ABZR87_RS10850	0.12	+0.9
2,298,090	-		ABZR87_RS10850	0.12	+0.2
2,298,092	+		ABZR87_RS10850	0.12	+0.2
2,298,092	+		ABZR87_RS10850	0.12	+0.6
2,298,093	-		ABZR87_RS10850	0.12	-0.4
2,298,161	+		ABZR87_RS10850	0.18	+0.0
2,298,182	+		ABZR87_RS10850	0.20	-0.7
2,298,182	+		ABZR87_RS10850	0.20	-0.4
2,298,182	+		ABZR87_RS10850	0.20	+1.0
2,298,182	+		ABZR87_RS10850	0.20	-1.0
2,298,183	-		ABZR87_RS10850	0.20	+1.1
2,298,183	-		ABZR87_RS10850	0.20	+0.4
2,298,183	-		ABZR87_RS10850	0.20	-0.2
2,298,277	+		ABZR87_RS10850	0.29	+0.6
2,298,278	-		ABZR87_RS10850	0.29	+0.3
2,298,519	-		ABZR87_RS10850	0.50	-1.2
2,298,569	+		ABZR87_RS10850	0.55	-0.5
2,298,569	+		ABZR87_RS10850	0.55	-0.8
2,298,569	+		ABZR87_RS10850	0.55	-0.4
2,298,722	+		ABZR87_RS10850	0.69	+0.9
2,298,723	-		ABZR87_RS10850	0.69	+0.9
2,298,723	-		ABZR87_RS10850	0.69	-0.5
2,298,723	-		ABZR87_RS10850	0.69	+0.1
2,298,723	-		ABZR87_RS10850	0.69	-1.2
2,298,758	+		ABZR87_RS10850	0.72	-1.1
2,298,758	+		ABZR87_RS10850	0.72	-1.3
2,298,759	-		ABZR87_RS10850	0.72	+0.1
2,298,759	-		ABZR87_RS10850	0.72	-1.3
2,298,759	-		ABZR87_RS10850	0.72	+0.2
2,298,866	+		ABZR87_RS10850	0.82	+0.4
2,298,866	+		ABZR87_RS10850	0.82	-1.1
2,298,866	+		ABZR87_RS10850	0.82	-0.3
2,298,866	+		ABZR87_RS10850	0.82	-1.0
2,298,867	-		ABZR87_RS10850	0.82	+0.9
2,299,010	+				-0.5
2,299,010	+				+0.6
2,299,010	+				+0.9
2,299,032	-				+0.1
2,299,067	+				-1.4
2,299,068	-				+0.4
2,299,144	-				+0.4
2,299,144	-				-1.5
2,299,221	+				-0.9
2,299,234	+				+1.6
2,299,234	+				+0.4
2,299,234	+				+0.9
2,299,234	+				+1.2
2,299,235	-				-0.2
2,299,235	-				+0.7
2,299,235	-				-1.4
2,299,458	+		ABZR87_RS10855	0.32	-0.7
2,299,458	+		ABZR87_RS10855	0.32	-0.1
2,299,458	+		ABZR87_RS10855	0.32	-0.9
2,299,459	-		ABZR87_RS10855	0.33	+0.1
2,299,459	-		ABZR87_RS10855	0.33	+0.9
2,299,479	+		ABZR87_RS10855	0.35	+1.1
2,299,479	+		ABZR87_RS10855	0.35	-0.6
2,299,479	+		ABZR87_RS10855	0.35	+0.4
2,299,479	+		ABZR87_RS10855	0.35	-0.5
2,299,479	+		ABZR87_RS10855	0.35	+0.4
2,299,479	+		ABZR87_RS10855	0.35	+0.1
2,299,480	-		ABZR87_RS10855	0.35	-0.3
2,299,480	-		ABZR87_RS10855	0.35	-0.5
2,299,480	-		ABZR87_RS10855	0.35	+0.2
2,299,480	-		ABZR87_RS10855	0.35	+0.8
2,299,546	-		ABZR87_RS10855	0.41	-1.2
2,299,546	-		ABZR87_RS10855	0.41	-0.6
2,299,746	+		ABZR87_RS10855	0.62	+0.7
2,299,747	-		ABZR87_RS10855	0.62	+2.1
2,299,747	-		ABZR87_RS10855	0.62	+0.2
2,299,940	-		ABZR87_RS10855	0.82	-1.1
2,299,940	-		ABZR87_RS10855	0.82	+1.1
2,300,015	+		ABZR87_RS10855	0.90	-1.1
2,300,015	+		ABZR87_RS10855	0.90	+0.2