Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10540
Experiment: Ra1_0.1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ra1_0.1 |
---|---|---|---|---|---|
remove | |||||
2,230,087 | + | +0.7 | |||
2,230,088 | - | +0.9 | |||
2,230,088 | - | +0.4 | |||
2,230,096 | + | -0.8 | |||
2,230,097 | - | -0.4 | |||
2,230,132 | + | -2.6 | |||
2,230,133 | - | -1.3 | |||
2,230,394 | + | ABZR87_RS10540 | 0.51 | +1.5 | |
2,230,395 | - | ABZR87_RS10540 | 0.51 | -1.6 | |
2,230,395 | - | ABZR87_RS10540 | 0.51 | -0.3 | |
2,230,457 | + | ABZR87_RS10540 | 0.62 | -0.1 | |
2,230,457 | + | ABZR87_RS10540 | 0.62 | -0.3 | |
2,230,458 | - | ABZR87_RS10540 | 0.62 | -2.0 | |
2,230,458 | - | ABZR87_RS10540 | 0.62 | -0.4 | |
2,230,458 | - | ABZR87_RS10540 | 0.62 | -2.1 | |
2,230,571 | + | ABZR87_RS10540 | 0.82 | -0.3 | |
2,230,571 | + | ABZR87_RS10540 | 0.82 | -0.4 | |
2,230,572 | - | ABZR87_RS10540 | 0.82 | +0.2 | |
2,230,608 | - | ABZR87_RS10540 | 0.89 | -0.8 | |
2,230,662 | - | -0.6 | |||
2,230,693 | + | +0.7 | |||
2,230,693 | + | -0.2 | |||
2,230,745 | + | +0.7 | |||
2,230,746 | - | +0.7 | |||
2,230,760 | + | -0.5 |
Or see this region's nucleotide sequence