Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10105

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,146,660	+		ABZR87_RS10095	0.26	-1.1
2,146,660	+		ABZR87_RS10095	0.26	+0.4
2,146,661	-		ABZR87_RS10095	0.27	-1.0
2,146,661	-		ABZR87_RS10095	0.27	+0.9
2,146,661	-		ABZR87_RS10095	0.27	-0.9
2,146,712	-		ABZR87_RS10095	0.34	-0.2
2,146,723	+		ABZR87_RS10095	0.36	-0.4
2,146,724	-		ABZR87_RS10095	0.36	+2.7
2,146,724	-		ABZR87_RS10095	0.36	-0.9
2,146,724	-		ABZR87_RS10095	0.36	+0.8
2,146,798	+		ABZR87_RS10095	0.47	+0.1
2,146,798	+		ABZR87_RS10095	0.47	-1.7
2,146,799	-		ABZR87_RS10095	0.47	+0.2
2,146,799	-		ABZR87_RS10095	0.47	+1.7
2,146,940	+		ABZR87_RS10095	0.69	+1.7
2,146,941	-		ABZR87_RS10095	0.69	-0.0
2,147,047	+		ABZR87_RS10095	0.85	-0.9
2,147,047	+		ABZR87_RS10095	0.85	-0.6
2,147,047	+		ABZR87_RS10095	0.85	-0.3
2,147,047	+		ABZR87_RS10095	0.85	+0.0
2,147,047	+		ABZR87_RS10095	0.85	-1.2
2,147,047	+		ABZR87_RS10095	0.85	+1.0
2,147,048	-		ABZR87_RS10095	0.85	+0.6
2,147,048	-		ABZR87_RS10095	0.85	-2.8
2,147,048	-		ABZR87_RS10095	0.85	-0.1
2,147,048	-		ABZR87_RS10095	0.85	-1.1
2,147,092	+				-1.1
2,147,166	+				-0.4
2,147,166	+				+0.2
2,147,166	+				+0.7
2,147,166	+				+0.2
2,147,166	+				+0.5
2,147,166	+				+0.6
2,147,166	+				+0.0
2,147,167	-				+3.7
2,147,167	-				+0.6
2,147,167	-				-0.3
2,147,259	-		ABZR87_RS10100	0.30	+0.8
2,147,280	-		ABZR87_RS10100	0.35	+0.1
2,147,354	+		ABZR87_RS10100	0.54	+0.6
2,147,354	+		ABZR87_RS10100	0.54	-0.1
2,147,355	-		ABZR87_RS10100	0.54	+1.4
2,147,355	-		ABZR87_RS10100	0.54	-0.8
2,147,355	-		ABZR87_RS10100	0.54	+1.1
2,147,384	+		ABZR87_RS10100	0.61	-1.2
2,147,436	+		ABZR87_RS10100	0.74	+0.6
2,147,436	+		ABZR87_RS10100	0.74	+0.7
2,147,437	-		ABZR87_RS10100	0.74	-1.4
2,147,437	-		ABZR87_RS10100	0.74	+0.5
2,147,493	+		ABZR87_RS10100	0.88	+0.6
2,147,494	-		ABZR87_RS10100	0.89	+0.2
2,147,494	-		ABZR87_RS10100	0.89	+0.2
2,147,537	+				+0.2
2,147,538	-				+0.1
2,147,575	+				+1.7
2,147,575	+				-0.7
2,147,576	-				-1.0
2,147,576	-				+0.2
2,147,576	-				+0.2
2,147,646	+				-1.0
2,147,781	+		ABZR87_RS10105	0.18	-0.2
2,147,782	-		ABZR87_RS10105	0.19	-0.3
2,147,869	+		ABZR87_RS10105	0.26	-0.2
2,147,869	+		ABZR87_RS10105	0.26	+0.8
2,147,869	+		ABZR87_RS10105	0.26	-1.4
2,147,869	+		ABZR87_RS10105	0.26	+0.7
2,147,869	+		ABZR87_RS10105	0.26	-1.2
2,147,869	+		ABZR87_RS10105	0.26	+1.1
2,147,870	-		ABZR87_RS10105	0.26	-0.6
2,147,870	-		ABZR87_RS10105	0.26	-0.3
2,147,870	-		ABZR87_RS10105	0.26	-0.8
2,147,873	+		ABZR87_RS10105	0.27	-1.9
2,147,873	+		ABZR87_RS10105	0.27	-0.6
2,147,874	-		ABZR87_RS10105	0.27	-0.1
2,147,874	-		ABZR87_RS10105	0.27	-0.3
2,147,874	-		ABZR87_RS10105	0.27	-1.4
2,147,874	-		ABZR87_RS10105	0.27	+1.7
2,148,113	+		ABZR87_RS10105	0.48	+0.4
2,148,113	+		ABZR87_RS10105	0.48	+0.0
2,148,113	+		ABZR87_RS10105	0.48	+0.6
2,148,114	-		ABZR87_RS10105	0.48	-0.8
2,148,114	-		ABZR87_RS10105	0.48	-0.4
2,148,131	+		ABZR87_RS10105	0.50	-0.5
2,148,131	+		ABZR87_RS10105	0.50	+0.7
2,148,132	-		ABZR87_RS10105	0.50	-0.3
2,148,132	-		ABZR87_RS10105	0.50	+1.2
2,148,132	-		ABZR87_RS10105	0.50	-1.5
2,148,132	-		ABZR87_RS10105	0.50	+0.1
2,148,167	+		ABZR87_RS10105	0.53	-0.6
2,148,168	-		ABZR87_RS10105	0.53	+0.1
2,148,168	-		ABZR87_RS10105	0.53	+0.4
2,148,170	+		ABZR87_RS10105	0.53	+2.7
2,148,170	+		ABZR87_RS10105	0.53	+0.3
2,148,170	+		ABZR87_RS10105	0.53	+1.3
2,148,170	+		ABZR87_RS10105	0.53	+1.0
2,148,170	+		ABZR87_RS10105	0.53	+3.8
2,148,170	+		ABZR87_RS10105	0.53	-1.5
2,148,170	+		ABZR87_RS10105	0.53	-0.6
2,148,170	+		ABZR87_RS10105	0.53	+2.1
2,148,170	+		ABZR87_RS10105	0.53	+0.2
2,148,171	-		ABZR87_RS10105	0.53	+0.6
2,148,171	-		ABZR87_RS10105	0.53	+0.2
2,148,171	-		ABZR87_RS10105	0.53	+2.5
2,148,171	-		ABZR87_RS10105	0.53	-1.4
2,148,171	-		ABZR87_RS10105	0.53	-0.8
2,148,197	+		ABZR87_RS10105	0.56	-0.5
2,148,197	+		ABZR87_RS10105	0.56	-0.6
2,148,197	+		ABZR87_RS10105	0.56	+0.2
2,148,198	-		ABZR87_RS10105	0.56	+0.8
2,148,198	-		ABZR87_RS10105	0.56	+0.8
2,148,257	-		ABZR87_RS10105	0.61	-0.4
2,148,362	+		ABZR87_RS10105	0.71	-0.6
2,148,569	+		ABZR87_RS10105	0.89	+0.7
2,148,570	-		ABZR87_RS10105	0.89	-0.3
2,148,686	+				-0.9
2,148,687	-				+0.7
2,148,774	+		ABZR87_RS10110	0.11	-1.0
2,148,774	+		ABZR87_RS10110	0.11	+0.8
2,148,774	+		ABZR87_RS10110	0.11	+1.6
2,148,774	+		ABZR87_RS10110	0.11	+0.7
2,148,775	-		ABZR87_RS10110	0.11	+0.5
2,148,775	-		ABZR87_RS10110	0.11	+1.0
2,148,789	+		ABZR87_RS10110	0.13	+0.4
2,148,789	+		ABZR87_RS10110	0.13	+0.7
2,148,790	-		ABZR87_RS10110	0.13	+0.4
2,148,790	-		ABZR87_RS10110	0.13	-0.0
2,148,825	+		ABZR87_RS10110	0.18	-0.7
2,148,825	+		ABZR87_RS10110	0.18	+0.5
2,148,826	-		ABZR87_RS10110	0.18	-1.1
2,148,826	-		ABZR87_RS10110	0.18	-2.0
2,148,975	-		ABZR87_RS10110	0.38	-0.7
2,149,057	+		ABZR87_RS10110	0.50	+0.7
2,149,058	-		ABZR87_RS10110	0.50	-0.7
2,149,276	+		ABZR87_RS10110	0.80	-0.3
2,149,314	-		ABZR87_RS10110	0.85	-1.3
2,149,314	-		ABZR87_RS10110	0.85	-1.8
2,149,390	+				-0.8
2,149,390	+				-0.1
2,149,390	+				-0.9
2,149,390	+				-0.1
2,149,390	+				+0.1
2,149,391	-				-1.6
2,149,391	-				-1.7
2,149,391	-				-0.4
2,149,395	+				-0.2
2,149,395	+				+0.9
2,149,396	-				-1.4
2,149,409	+				-1.4
2,149,409	+				-0.2
2,149,409	+				-0.2
2,149,410	-				-0.9
2,149,410	-				+1.0
2,149,416	+				-0.7
2,149,416	+				+1.1
2,149,417	-				-1.4