Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS10090

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
2,145,335	-				+0.5
2,145,335	-				+1.2
2,145,394	+				+1.0
2,145,394	+				+0.2
2,145,394	+				+3.2
2,145,394	+				+0.7
2,145,394	+				+1.2
2,145,395	-				-0.4
2,145,395	-				-0.5
2,145,395	-				+0.3
2,145,395	-				-0.8
2,145,395	-				-0.3
2,145,395	-				+1.1
2,145,395	-				+1.3
2,145,395	-				-0.3
2,145,399	+				+0.6
2,145,399	+				+1.4
2,145,399	+				+1.0
2,145,400	-				+2.7
2,145,400	-				+0.4
2,145,400	-				-0.8
2,145,400	-				+0.6
2,145,400	-				-0.1
2,145,461	+				+1.0
2,145,462	-				+0.3
2,145,462	-				+2.3
2,145,462	-				+0.6
2,145,481	+				+1.9
2,145,482	-				-1.8
2,145,561	+				-1.0
2,145,561	+				-1.1
2,145,562	-				-1.7
2,145,562	-				-0.1
2,145,562	-				-1.0
2,145,644	+		ABZR87_RS10090	0.17	-1.0
2,145,645	-		ABZR87_RS10090	0.17	-1.0
2,145,645	-		ABZR87_RS10090	0.17	+0.2
2,145,645	-		ABZR87_RS10090	0.17	-0.1
2,145,645	-		ABZR87_RS10090	0.17	-2.1
2,145,648	+		ABZR87_RS10090	0.17	-0.1
2,145,648	+		ABZR87_RS10090	0.17	+0.5
2,145,649	-		ABZR87_RS10090	0.17	-0.6
2,145,649	-		ABZR87_RS10090	0.17	-1.6
2,145,649	-		ABZR87_RS10090	0.17	-1.5
2,145,705	+		ABZR87_RS10090	0.23	+1.1
2,145,705	+		ABZR87_RS10090	0.23	-1.0
2,145,706	-		ABZR87_RS10090	0.23	-1.1
2,145,706	-		ABZR87_RS10090	0.23	+0.0
2,145,815	+		ABZR87_RS10090	0.33	-1.7
2,145,815	+		ABZR87_RS10090	0.33	+0.9
2,145,816	-		ABZR87_RS10090	0.33	-0.1
2,145,816	-		ABZR87_RS10090	0.33	-0.1
2,145,816	-		ABZR87_RS10090	0.33	-0.5
2,145,816	-		ABZR87_RS10090	0.33	-2.2
2,145,837	-		ABZR87_RS10090	0.35	+2.7
2,146,007	-		ABZR87_RS10090	0.52	-0.5
2,146,044	+		ABZR87_RS10090	0.55	-2.1
2,146,088	+		ABZR87_RS10090	0.60	+0.1
2,146,088	+		ABZR87_RS10090	0.60	-1.9
2,146,089	-		ABZR87_RS10090	0.60	-1.2
2,146,089	-		ABZR87_RS10090	0.60	-1.1
2,146,089	-		ABZR87_RS10090	0.60	-0.9
2,146,089	-		ABZR87_RS10090	0.60	-0.9
2,146,089	-		ABZR87_RS10090	0.60	-1.8
2,146,089	-		ABZR87_RS10090	0.60	-0.6
2,146,089	-		ABZR87_RS10090	0.60	+0.9
2,146,089	-		ABZR87_RS10090	0.60	+0.8
2,146,110	+		ABZR87_RS10090	0.62	-1.2
2,146,110	+		ABZR87_RS10090	0.62	+0.4
2,146,110	+		ABZR87_RS10090	0.62	-0.3
2,146,110	+		ABZR87_RS10090	0.62	+0.7
2,146,111	-		ABZR87_RS10090	0.62	-0.2
2,146,111	-		ABZR87_RS10090	0.62	+0.1
2,146,111	-		ABZR87_RS10090	0.62	-0.4
2,146,139	-		ABZR87_RS10090	0.65	-2.1
2,146,181	+		ABZR87_RS10090	0.69	-0.1
2,146,181	+		ABZR87_RS10090	0.69	-0.2
2,146,181	+		ABZR87_RS10090	0.69	-1.2
2,146,181	+		ABZR87_RS10090	0.69	-0.1
2,146,182	-		ABZR87_RS10090	0.69	-1.3
2,146,203	+		ABZR87_RS10090	0.71	+0.7
2,146,204	-		ABZR87_RS10090	0.71	+0.6
2,146,299	+		ABZR87_RS10090	0.80	+0.4
2,146,300	-		ABZR87_RS10090	0.80	+0.1
2,146,300	-		ABZR87_RS10090	0.80	-1.5
2,146,301	-		ABZR87_RS10090	0.80	-1.6
2,146,460	+				+0.2
2,146,660	+		ABZR87_RS10095	0.26	-1.1
2,146,660	+		ABZR87_RS10095	0.26	+0.4
2,146,661	-		ABZR87_RS10095	0.27	-1.0
2,146,661	-		ABZR87_RS10095	0.27	+0.9
2,146,661	-		ABZR87_RS10095	0.27	-0.9
2,146,712	-		ABZR87_RS10095	0.34	-0.2
2,146,723	+		ABZR87_RS10095	0.36	-0.4
2,146,724	-		ABZR87_RS10095	0.36	+2.7
2,146,724	-		ABZR87_RS10095	0.36	-0.9
2,146,724	-		ABZR87_RS10095	0.36	+0.8
2,146,798	+		ABZR87_RS10095	0.47	+0.1
2,146,798	+		ABZR87_RS10095	0.47	-1.7
2,146,799	-		ABZR87_RS10095	0.47	+0.2
2,146,799	-		ABZR87_RS10095	0.47	+1.7
2,146,940	+		ABZR87_RS10095	0.69	+1.7
2,146,941	-		ABZR87_RS10095	0.69	-0.0
2,147,047	+		ABZR87_RS10095	0.85	-0.9
2,147,047	+		ABZR87_RS10095	0.85	-0.6
2,147,047	+		ABZR87_RS10095	0.85	-0.3
2,147,047	+		ABZR87_RS10095	0.85	+0.0
2,147,047	+		ABZR87_RS10095	0.85	-1.2
2,147,047	+		ABZR87_RS10095	0.85	+1.0
2,147,048	-		ABZR87_RS10095	0.85	+0.6
2,147,048	-		ABZR87_RS10095	0.85	-2.8
2,147,048	-		ABZR87_RS10095	0.85	-0.1
2,147,048	-		ABZR87_RS10095	0.85	-1.1
2,147,092	+				-1.1
2,147,166	+				-0.4
2,147,166	+				+0.2
2,147,166	+				+0.7
2,147,166	+				+0.2
2,147,166	+				+0.5
2,147,166	+				+0.6
2,147,166	+				+0.0
2,147,167	-				+3.7
2,147,167	-				+0.6
2,147,167	-				-0.3
2,147,259	-		ABZR87_RS10100	0.30	+0.8
2,147,280	-		ABZR87_RS10100	0.35	+0.1
2,147,354	+		ABZR87_RS10100	0.54	+0.6
2,147,354	+		ABZR87_RS10100	0.54	-0.1
2,147,355	-		ABZR87_RS10100	0.54	+1.4
2,147,355	-		ABZR87_RS10100	0.54	-0.8
2,147,355	-		ABZR87_RS10100	0.54	+1.1
2,147,384	+		ABZR87_RS10100	0.61	-1.2
2,147,436	+		ABZR87_RS10100	0.74	+0.6
2,147,436	+		ABZR87_RS10100	0.74	+0.7
2,147,437	-		ABZR87_RS10100	0.74	-1.4
2,147,437	-		ABZR87_RS10100	0.74	+0.5
2,147,493	+		ABZR87_RS10100	0.88	+0.6
2,147,494	-		ABZR87_RS10100	0.89	+0.2
2,147,494	-		ABZR87_RS10100	0.89	+0.2