Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS09385

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
1,988,669	+				-0.3
1,988,775	+				+0.2
1,988,775	+				-0.6
1,988,775	+				+0.1
1,988,776	-				+0.1
1,988,801	-				+0.1
1,988,801	-				+0.1
1,988,873	+				+0.3
1,988,873	+				-0.4
1,988,874	-				-0.1
1,988,880	-				+0.2
1,988,880	-				-3.1
1,989,089	+		ABZR87_RS09380	0.31	-2.1
1,989,090	-		ABZR87_RS09380	0.31	-0.4
1,989,283	-		ABZR87_RS09380	0.66	+0.0
1,989,283	-		ABZR87_RS09380	0.66	+0.5
1,989,291	-		ABZR87_RS09380	0.67	-0.1
1,989,396	+		ABZR87_RS09380	0.86	-0.1
1,989,396	+		ABZR87_RS09380	0.86	+0.4
1,989,396	+		ABZR87_RS09380	0.86	+0.6
1,989,396	+		ABZR87_RS09380	0.86	-0.0
1,989,397	-		ABZR87_RS09380	0.86	+0.0
1,989,397	-		ABZR87_RS09380	0.86	-1.3
1,989,397	-		ABZR87_RS09380	0.86	-1.7
1,989,397	-		ABZR87_RS09380	0.86	-0.7
1,989,397	-		ABZR87_RS09380	0.86	-0.6
1,989,397	-		ABZR87_RS09380	0.86	-0.2
1,989,465	+				+1.0
1,989,465	+				+1.4
1,989,465	+				-0.2
1,989,466	-				-0.3
1,989,466	-				+0.3
1,989,471	+				-1.0
1,989,472	-				+0.3
1,989,472	-				-2.6
1,989,562	-				-1.9
1,989,597	-				-1.4
1,989,642	+		ABZR87_RS09385	0.11	+0.5
1,989,643	-		ABZR87_RS09385	0.11	-0.2
1,989,807	+		ABZR87_RS09385	0.33	-1.1
1,989,807	+		ABZR87_RS09385	0.33	-1.5
1,989,807	+		ABZR87_RS09385	0.33	+0.1
1,989,808	-		ABZR87_RS09385	0.33	+1.2
1,989,808	-		ABZR87_RS09385	0.33	-0.1
1,989,836	-		ABZR87_RS09385	0.37	+0.7
1,989,836	-		ABZR87_RS09385	0.37	+0.2
1,989,849	+		ABZR87_RS09385	0.38	-0.8
1,989,849	+		ABZR87_RS09385	0.38	+1.9
1,989,849	+		ABZR87_RS09385	0.38	-0.1
1,989,912	+		ABZR87_RS09385	0.47	-0.1
1,989,912	+		ABZR87_RS09385	0.47	+1.1
1,989,913	-		ABZR87_RS09385	0.47	+2.7
1,989,913	-		ABZR87_RS09385	0.47	+2.7
1,990,217	-		ABZR87_RS09385	0.88	+0.5
1,990,224	+		ABZR87_RS09385	0.89	+0.7
1,990,273	-				+0.1
1,990,273	-				-0.5
1,990,303	-				-0.3
1,990,340	+				+0.5
1,990,341	-				-1.0
1,990,372	-				-0.6
1,990,376	+				+1.1
1,990,377	-				-1.0
1,990,395	-				+0.3
1,990,395	-				-1.4
1,990,395	-				-0.4
1,990,395	-				-0.1
1,990,439	+				-0.3
1,990,439	+				+0.3
1,990,439	+				+0.7
1,990,439	+				-2.5
1,990,439	+				-1.8
1,990,439	+				+0.1
1,990,440	-				+0.0
1,990,440	-				-0.7
1,990,440	-				+0.1
1,990,518	+				-0.4
1,990,518	+				+0.0
1,990,519	-				-0.9
1,990,608	+				-0.1
1,990,608	+				-1.0
1,990,608	+				+0.4
1,990,609	-				-0.0
1,990,609	-				-0.8
1,990,609	-				+0.4
1,990,695	+				+1.7
1,990,696	-				+1.2
1,990,702	+				+1.3
1,990,702	+				-1.2
1,990,702	+				-1.2
1,990,702	+				-0.2
1,990,703	-				-0.8
1,990,703	-				-1.4
1,990,752	+				-0.7
1,990,752	+				+1.7
1,990,752	+				-0.0
1,990,753	-				+0.5
1,990,753	-				-0.6
1,990,753	-				-0.2
1,990,977	+		ABZR87_RS09390	0.18	-0.4
1,990,977	+		ABZR87_RS09390	0.18	-0.3
1,990,977	+		ABZR87_RS09390	0.18	-0.1
1,990,978	-		ABZR87_RS09390	0.18	-0.2
1,990,981	+		ABZR87_RS09390	0.18	+1.3
1,990,981	+		ABZR87_RS09390	0.18	-0.3
1,990,982	-		ABZR87_RS09390	0.18	-1.1
1,990,982	-		ABZR87_RS09390	0.18	-0.4
1,991,028	+		ABZR87_RS09390	0.20	+0.0
1,991,028	+		ABZR87_RS09390	0.20	-1.1
1,991,028	+		ABZR87_RS09390	0.20	+0.5
1,991,031	-		ABZR87_RS09390	0.20	-0.5
1,991,047	-		ABZR87_RS09390	0.20	-1.1
1,991,082	+		ABZR87_RS09390	0.22	+0.4
1,991,082	+		ABZR87_RS09390	0.22	-0.5
1,991,111	+		ABZR87_RS09390	0.23	+0.7
1,991,111	+		ABZR87_RS09390	0.23	-0.4
1,991,112	-		ABZR87_RS09390	0.23	+0.2
1,991,112	-		ABZR87_RS09390	0.23	+1.1
1,991,247	+		ABZR87_RS09390	0.28	-1.4
1,991,248	-		ABZR87_RS09390	0.28	-1.9
1,991,248	-		ABZR87_RS09390	0.28	+1.1
1,991,248	-		ABZR87_RS09390	0.28	+0.3