Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS08365

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
1,778,935	+				-0.4
1,779,013	+		ABZR87_RS08360	0.13	+0.6
1,779,014	-		ABZR87_RS08360	0.13	+0.6
1,779,014	-		ABZR87_RS08360	0.13	+0.1
1,779,014	-		ABZR87_RS08360	0.13	-0.9
1,779,014	-		ABZR87_RS08360	0.13	-1.1
1,779,040	+		ABZR87_RS08360	0.16	+0.7
1,779,041	-		ABZR87_RS08360	0.16	+1.7
1,779,106	+		ABZR87_RS08360	0.23	+0.2
1,779,307	+		ABZR87_RS08360	0.47	+0.2
1,779,308	-		ABZR87_RS08360	0.47	+1.7
1,779,448	-		ABZR87_RS08360	0.63	+0.7
1,779,478	+		ABZR87_RS08360	0.66	-1.6
1,779,478	+		ABZR87_RS08360	0.66	-1.7
1,779,478	+		ABZR87_RS08360	0.66	-0.1
1,779,478	+		ABZR87_RS08360	0.66	+0.3
1,779,478	+		ABZR87_RS08360	0.66	-0.2
1,779,479	-		ABZR87_RS08360	0.67	-1.3
1,779,479	-		ABZR87_RS08360	0.67	+1.1
1,779,479	-		ABZR87_RS08360	0.67	-1.7
1,779,479	-		ABZR87_RS08360	0.67	-0.1
1,779,479	-		ABZR87_RS08360	0.67	+0.1
1,779,479	-		ABZR87_RS08360	0.67	+1.8
1,779,743	+				-1.0
1,779,744	-				-1.9
1,779,753	-				-0.3
1,779,802	+				+0.3
1,779,802	+				+0.7
1,779,802	+				+1.2
1,779,802	+				+0.0
1,779,802	+				-0.1
1,779,803	-				-0.1
1,779,803	-				-1.1
1,779,803	-				-2.3
1,779,840	-				-2.2
1,779,840	-				+0.1
1,779,843	+				+0.5
1,779,870	+				-2.0
1,780,063	+		ABZR87_RS08365	0.21	-0.5
1,780,071	+		ABZR87_RS08365	0.22	-0.1
1,780,282	+		ABZR87_RS08365	0.46	+0.1
1,780,282	+		ABZR87_RS08365	0.46	-0.3
1,780,282	+		ABZR87_RS08365	0.46	-0.2
1,780,282	+		ABZR87_RS08365	0.46	-1.7
1,780,282	+		ABZR87_RS08365	0.46	-1.6
1,780,283	-		ABZR87_RS08365	0.46	+1.4
1,780,283	-		ABZR87_RS08365	0.46	-2.0
1,780,283	-		ABZR87_RS08365	0.46	+0.2
1,780,452	+		ABZR87_RS08365	0.65	-0.8
1,780,635	+		ABZR87_RS08365	0.85	-1.1
1,780,635	+		ABZR87_RS08365	0.85	+0.2
1,780,635	+		ABZR87_RS08365	0.85	-1.1
1,780,636	-		ABZR87_RS08365	0.85	-1.2
1,780,636	-		ABZR87_RS08365	0.85	+0.7
1,780,654	+		ABZR87_RS08365	0.87	-1.5
1,780,655	-		ABZR87_RS08365	0.87	+0.0
1,780,655	-		ABZR87_RS08365	0.87	+1.7
1,780,655	-		ABZR87_RS08365	0.87	-0.6
1,780,655	-		ABZR87_RS08365	0.87	+0.0
1,780,768	+				-0.5
1,780,862	+				-0.3
1,780,862	+				-0.1
1,780,863	-				-0.4
1,781,068	+				+0.3
1,781,069	-				-2.9
1,781,069	-				-1.4
1,781,169	+				+0.0
1,781,267	+		ABZR87_RS08370	0.18	-1.2
1,781,341	+		ABZR87_RS08370	0.34	-0.7
1,781,341	+		ABZR87_RS08370	0.34	-1.2
1,781,441	-		ABZR87_RS08370	0.55	-0.2
1,781,511	-		ABZR87_RS08370	0.70	-1.5
1,781,516	+		ABZR87_RS08370	0.71	-0.1
1,781,539	+		ABZR87_RS08370	0.76	+0.7
1,781,539	+		ABZR87_RS08370	0.76	-1.3
1,781,540	-		ABZR87_RS08370	0.76	+0.2
1,781,540	-		ABZR87_RS08370	0.76	-0.7
1,781,540	-		ABZR87_RS08370	0.76	-0.9
1,781,570	+		ABZR87_RS08370	0.82	-0.1
1,781,570	+		ABZR87_RS08370	0.82	-0.3
1,781,571	-		ABZR87_RS08370	0.83	+0.2
1,781,571	-		ABZR87_RS08370	0.83	-0.4
1,781,571	-		ABZR87_RS08370	0.83	-0.7
1,781,706	+				-0.3