Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS07370

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
1,559,046	+		ABZR87_RS07365	0.13	-0.0
1,559,046	+		ABZR87_RS07365	0.13	+0.6
1,559,046	+		ABZR87_RS07365	0.13	-0.0
1,559,047	-		ABZR87_RS07365	0.13	+1.3
1,559,136	+		ABZR87_RS07365	0.23	-0.3
1,559,136	+		ABZR87_RS07365	0.23	-1.0
1,559,137	-		ABZR87_RS07365	0.23	-0.6
1,559,256	+		ABZR87_RS07365	0.36	-1.1
1,559,257	-		ABZR87_RS07365	0.36	+0.1
1,559,384	-		ABZR87_RS07365	0.50	+1.4
1,559,503	-		ABZR87_RS07365	0.63	-0.3
1,559,511	+		ABZR87_RS07365	0.64	-0.8
1,559,706	+		ABZR87_RS07365	0.85	+1.1
1,559,707	-		ABZR87_RS07365	0.85	-0.5
1,559,707	-		ABZR87_RS07365	0.85	-0.3
1,559,707	-		ABZR87_RS07365	0.85	-0.4
1,559,739	+		ABZR87_RS07365	0.89	+2.0
1,559,739	+		ABZR87_RS07365	0.89	-0.2
1,559,739	+		ABZR87_RS07365	0.89	+0.7
1,559,739	+		ABZR87_RS07365	0.89	+0.4
1,559,739	+		ABZR87_RS07365	0.89	-0.3
1,559,740	-		ABZR87_RS07365	0.89	+0.4
1,559,740	-		ABZR87_RS07365	0.89	+2.0
1,559,740	-		ABZR87_RS07365	0.89	-1.8
1,559,740	-		ABZR87_RS07365	0.89	+0.3
1,559,740	-		ABZR87_RS07365	0.89	-0.4
1,559,740	-		ABZR87_RS07365	0.89	-1.9
1,559,745	+		ABZR87_RS07365	0.89	-0.3
1,559,746	-		ABZR87_RS07365	0.89	-1.2
1,560,454	-		ABZR87_RS07370	0.46	-0.2
1,560,511	+		ABZR87_RS07370	0.51	-0.1
1,560,511	+		ABZR87_RS07370	0.51	+0.1
1,560,511	+		ABZR87_RS07370	0.51	-1.6
1,560,511	+		ABZR87_RS07370	0.51	+0.4
1,560,512	-		ABZR87_RS07370	0.51	+1.0
1,560,512	-		ABZR87_RS07370	0.51	-2.9
1,560,512	-		ABZR87_RS07370	0.51	+0.3
1,560,512	-		ABZR87_RS07370	0.51	-0.3
1,560,673	+		ABZR87_RS07370	0.64	-0.0
1,560,674	-		ABZR87_RS07370	0.64	-0.3
1,560,674	-		ABZR87_RS07370	0.64	-1.1
1,560,674	-		ABZR87_RS07370	0.64	-2.2
1,560,674	-		ABZR87_RS07370	0.64	-1.4
1,560,733	+		ABZR87_RS07370	0.69	-0.0
1,560,733	+		ABZR87_RS07370	0.69	-0.6
1,560,733	+		ABZR87_RS07370	0.69	-0.7
1,560,928	+		ABZR87_RS07370	0.84	-1.9
1,560,928	+		ABZR87_RS07370	0.84	-1.1
1,560,928	+		ABZR87_RS07370	0.84	-0.1
1,560,928	+		ABZR87_RS07370	0.84	+2.7
1,560,928	+		ABZR87_RS07370	0.84	-0.7
1,560,929	-		ABZR87_RS07370	0.84	+0.0
1,560,929	-		ABZR87_RS07370	0.84	+0.9
1,560,994	+		ABZR87_RS07370	0.90	-1.3
1,560,995	-		ABZR87_RS07370	0.90	-1.1
1,560,995	-		ABZR87_RS07370	0.90	-0.4
1,561,009	+				-1.1
1,561,009	+				-0.6
1,561,009	+				-0.0
1,561,010	-				+0.5
1,561,010	-				+0.0
1,561,010	-				+0.6
1,561,043	-				+0.6
1,561,105	+				+0.7
1,561,106	-				+1.7
1,561,106	-				+0.5
1,561,167	+				+0.1
1,561,168	-				+0.3
1,561,168	-				-0.2
1,561,225	+				-0.8
1,561,309	+		ABZR87_RS07375	0.22	-0.5
1,561,309	+		ABZR87_RS07375	0.22	+0.4
1,561,309	+		ABZR87_RS07375	0.22	-1.2
1,561,310	-		ABZR87_RS07375	0.22	-1.3
1,561,310	-		ABZR87_RS07375	0.22	-1.1
1,561,310	-		ABZR87_RS07375	0.22	+0.9
1,561,310	-		ABZR87_RS07375	0.22	-0.6
1,561,310	-		ABZR87_RS07375	0.22	+0.8
1,561,310	-		ABZR87_RS07375	0.22	+0.2
1,561,330	-		ABZR87_RS07375	0.26	-0.7
1,561,402	+		ABZR87_RS07375	0.38	+0.2
1,561,403	-		ABZR87_RS07375	0.38	+0.0
1,561,403	-		ABZR87_RS07375	0.38	-0.0
1,561,429	+		ABZR87_RS07375	0.43	-0.4
1,561,525	+		ABZR87_RS07375	0.59	+0.4
1,561,525	+		ABZR87_RS07375	0.59	-2.1
1,561,525	+		ABZR87_RS07375	0.59	+0.3
1,561,526	-		ABZR87_RS07375	0.59	-0.0
1,561,526	-		ABZR87_RS07375	0.59	+0.6
1,561,526	-		ABZR87_RS07375	0.59	-0.5
1,561,648	+		ABZR87_RS07375	0.80	+0.3
1,561,648	+		ABZR87_RS07375	0.80	-0.0
1,561,648	+		ABZR87_RS07375	0.80	-0.7
1,561,648	+		ABZR87_RS07375	0.80	-0.4
1,561,648	+		ABZR87_RS07375	0.80	+1.8
1,561,648	+		ABZR87_RS07375	0.80	-0.4
1,561,648	+		ABZR87_RS07375	0.80	-2.7
1,561,648	+		ABZR87_RS07375	0.80	-0.8
1,561,649	-		ABZR87_RS07375	0.81	-0.3
1,561,649	-		ABZR87_RS07375	0.81	-0.2
1,561,649	-		ABZR87_RS07375	0.81	-1.4
1,561,649	-		ABZR87_RS07375	0.81	-0.9
1,561,649	-		ABZR87_RS07375	0.81	-0.1
1,561,649	-		ABZR87_RS07375	0.81	+0.6
1,561,649	-		ABZR87_RS07375	0.81	-2.7
1,561,649	-		ABZR87_RS07375	0.81	+0.8
1,561,649	-		ABZR87_RS07375	0.81	-0.4
1,561,649	-		ABZR87_RS07375	0.81	+0.7
1,561,649	-		ABZR87_RS07375	0.81	-0.7
1,561,649	-		ABZR87_RS07375	0.81	-1.6
1,561,649	-		ABZR87_RS07375	0.81	+0.4
1,561,649	-		ABZR87_RS07375	0.81	-0.0
1,561,649	-		ABZR87_RS07375	0.81	-1.0
1,561,649	-		ABZR87_RS07375	0.81	-0.8
1,561,649	-		ABZR87_RS07375	0.81	-0.9
1,561,649	-		ABZR87_RS07375	0.81	+1.0
1,561,649	-		ABZR87_RS07375	0.81	-1.6
1,561,649	-		ABZR87_RS07375	0.81	+0.3
1,561,675	+		ABZR87_RS07375	0.85	-0.2
1,561,675	+		ABZR87_RS07375	0.85	-1.2
1,561,675	+		ABZR87_RS07375	0.85	-0.6
1,561,676	-		ABZR87_RS07375	0.85	-0.5
1,561,676	-		ABZR87_RS07375	0.85	-1.4
1,561,751	+				+0.5
1,561,751	+				+0.6
1,561,752	-				+0.2
1,561,752	-				+0.2
1,561,841	+				-0.9
1,561,841	+				-0.2
1,561,841	+				+0.3
1,561,842	-				+0.8
1,561,842	-				+0.8
1,561,857	-				-0.6
1,561,893	+				+0.3
1,561,893	+				+0.6
1,561,894	-				+0.9
1,561,894	-				-0.6
1,561,907	-				-0.9
1,562,034	+				+0.8
1,562,034	+				+1.1
1,562,034	+				+0.6
1,562,034	+				+1.4
1,562,034	+				-2.0
1,562,040	+				-1.4
1,562,040	+				-1.7
1,562,041	-				+1.1
1,562,041	-				-0.0
1,562,041	-				+1.1
1,562,041	-				+1.4