Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS00385

Experiment: Ra1_0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ra1_0.1
77,619	+		ABZR87_RS00380	0.21	+1.7
78,145	+				+2.1
78,146	-				-3.0
78,325	+				+1.8
78,326	+				+3.0
78,326	+				+1.7
78,326	+				+2.3
78,326	+				+2.6
78,326	+				+2.5
78,326	+				+0.4
78,326	+				+2.3
78,326	+				+2.0
78,326	+				+2.7
78,326	+				+1.7
78,326	+				+2.8
78,326	+				+2.7
78,326	+				+3.1
78,327	-				-2.0
78,327	-				+0.7
78,327	-				-2.5
78,327	-				-3.0
78,327	-				-5.1
78,327	-				-1.5
78,327	-				-3.7
78,425	-				-2.3
78,453	+				+5.3
78,454	-				-2.9
78,454	-				-3.5
78,454	-				-3.6
78,497	+				+2.3
78,497	+				+2.7
78,497	+				+2.2
78,498	-				-2.8
78,498	-				-3.2
78,498	-				+1.7
78,532	+				-1.2
78,533	-				-3.4
78,533	-				-2.6
78,533	-				-5.1
78,533	-				-0.5
78,554	+				-3.3
78,555	-				-2.5
78,941	+		ABZR87_RS00385	0.61	-0.1
78,942	-		ABZR87_RS00385	0.61	-2.2
79,267	+				-0.9
79,267	+				-1.2
79,273	+				+0.5
79,274	-				-2.6
79,366	+				-2.0
79,366	+				-2.0
79,367	-				-2.1
79,464	+		ABZR87_RS00390	0.11	-2.1
79,464	+		ABZR87_RS00390	0.11	-3.4
79,464	+		ABZR87_RS00390	0.11	-2.1
79,464	+		ABZR87_RS00390	0.11	-3.0
79,464	+		ABZR87_RS00390	0.11	-3.6
79,464	+		ABZR87_RS00390	0.11	-0.9
79,464	+		ABZR87_RS00390	0.11	-1.7
79,464	+		ABZR87_RS00390	0.11	-2.6
79,465	-		ABZR87_RS00390	0.11	-2.1
79,465	-		ABZR87_RS00390	0.11	-3.5
79,674	+		ABZR87_RS00390	0.22	-1.0
79,674	+		ABZR87_RS00390	0.22	-2.1
79,675	-		ABZR87_RS00390	0.22	-1.0
79,675	-		ABZR87_RS00390	0.22	-2.6
79,675	-		ABZR87_RS00390	0.22	-3.3
79,675	-		ABZR87_RS00390	0.22	-3.6
79,675	-		ABZR87_RS00390	0.22	-2.2
79,675	-		ABZR87_RS00390	0.22	-1.0
79,829	-		ABZR87_RS00390	0.31	-1.9
79,829	-		ABZR87_RS00390	0.31	-2.5
79,829	-		ABZR87_RS00390	0.31	-1.7
79,888	+		ABZR87_RS00390	0.34	-4.4
79,888	+		ABZR87_RS00390	0.34	+0.1
79,889	-		ABZR87_RS00390	0.34	-2.8
79,889	-		ABZR87_RS00390	0.34	-3.6
79,889	-		ABZR87_RS00390	0.34	-4.9
79,891	+		ABZR87_RS00390	0.34	-1.3
79,891	+		ABZR87_RS00390	0.34	-4.6
79,891	+		ABZR87_RS00390	0.34	-1.7
79,891	+		ABZR87_RS00390	0.34	-3.1
79,891	+		ABZR87_RS00390	0.34	-2.1
79,891	+		ABZR87_RS00390	0.34	-1.6
79,892	-		ABZR87_RS00390	0.34	-2.7
79,892	-		ABZR87_RS00390	0.34	+2.7
79,892	-		ABZR87_RS00390	0.34	-3.7
80,080	-		ABZR87_RS00390	0.44	-1.2