Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15575

Experiment: Sucrose (C) and L-Glutamine (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with MOPS; with PEG
3,499,765	+		PFLU_RS15570	0.51	-0.1
3,499,765	+		PFLU_RS15570	0.51	+1.0
3,499,765	+		PFLU_RS15570	0.51	-0.7
3,499,765	+		PFLU_RS15570	0.51	+0.3
3,499,766	-		PFLU_RS15570	0.51	-0.1
3,499,860	+		PFLU_RS15570	0.58	-0.9
3,499,967	+		PFLU_RS15570	0.65	-0.3
3,500,260	+		PFLU_RS15570	0.85	+0.6
3,500,260	+		PFLU_RS15570	0.85	+0.2
3,500,261	-		PFLU_RS15570	0.85	+1.3
3,500,261	-		PFLU_RS15570	0.85	-1.4
3,500,327	+		PFLU_RS15570	0.90	-1.4
3,500,328	-				+0.6
3,500,328	-				-0.7
3,500,359	+				+0.2
3,500,359	+				-1.1
3,500,359	+				+0.1
3,500,359	+				-0.8
3,500,359	+				-2.2
3,500,360	-				+0.2
3,500,437	+				-0.4
3,500,484	-				+0.0
3,500,484	-				-0.6
3,500,485	+				+0.3
3,500,499	+				-0.3
3,500,500	-				+0.9
3,500,500	-				-0.8
3,500,500	-				+0.9
3,500,500	-				+0.5
3,500,500	-				-0.3
3,500,556	+		PFLU_RS15575	0.10	-0.7
3,500,650	+		PFLU_RS15575	0.21	+0.3
3,500,667	+		PFLU_RS15575	0.23	-0.5
3,500,667	+		PFLU_RS15575	0.23	-0.2
3,500,667	+		PFLU_RS15575	0.23	+0.7
3,500,667	+		PFLU_RS15575	0.23	-0.3
3,500,777	-		PFLU_RS15575	0.35	+0.2
3,501,091	+		PFLU_RS15575	0.71	-0.4
3,501,091	+		PFLU_RS15575	0.71	-1.1
3,501,091	+		PFLU_RS15575	0.71	-0.1
3,501,092	-		PFLU_RS15575	0.72	-1.4
3,501,141	-		PFLU_RS15575	0.77	-0.4
3,501,141	-		PFLU_RS15575	0.77	-1.3
3,501,420	+		PFLU_RS15580	0.22	-0.7
3,501,421	-		PFLU_RS15580	0.22	+0.4
3,501,526	+		PFLU_RS15580	0.46	-0.8
3,501,526	+		PFLU_RS15580	0.46	-0.4
3,501,526	+		PFLU_RS15580	0.46	-2.7
3,501,526	+		PFLU_RS15580	0.46	-1.8
3,501,526	+		PFLU_RS15580	0.46	+1.2
3,501,526	+		PFLU_RS15580	0.46	+0.3
3,501,526	+		PFLU_RS15580	0.46	+0.2
3,501,526	+		PFLU_RS15580	0.46	+1.2
3,501,526	+		PFLU_RS15580	0.46	-0.4
3,501,526	+		PFLU_RS15580	0.46	+0.1
3,501,527	-		PFLU_RS15580	0.47	+0.3
3,501,527	-		PFLU_RS15580	0.47	+0.8
3,501,527	-		PFLU_RS15580	0.47	+0.1
3,501,527	-		PFLU_RS15580	0.47	+0.5
3,501,527	-		PFLU_RS15580	0.47	+0.3
3,501,527	-		PFLU_RS15580	0.47	+0.6
3,501,527	-		PFLU_RS15580	0.47	+0.4
3,501,527	-		PFLU_RS15580	0.47	+0.1
3,501,527	-		PFLU_RS15580	0.47	-1.3
3,501,527	-		PFLU_RS15580	0.47	-2.3
3,501,527	-		PFLU_RS15580	0.47	-0.7
3,501,527	-		PFLU_RS15580	0.47	-0.3
3,501,527	-		PFLU_RS15580	0.47	-2.6
3,501,646	+		PFLU_RS15580	0.74	+1.4
3,501,647	-		PFLU_RS15580	0.74	+1.9
3,501,705	+		PFLU_RS15580	0.88	+1.7
3,501,706	-		PFLU_RS15580	0.88	-0.4
3,501,707	+		PFLU_RS15580	0.88	-0.0
3,501,707	+		PFLU_RS15580	0.88	-2.8
3,501,707	+		PFLU_RS15580	0.88	-0.6
3,501,707	+		PFLU_RS15580	0.88	-0.0
3,501,707	+		PFLU_RS15580	0.88	-0.7
3,501,707	+		PFLU_RS15580	0.88	-0.6
3,501,707	+		PFLU_RS15580	0.88	-1.6
3,501,707	+		PFLU_RS15580	0.88	-1.2
3,501,707	+		PFLU_RS15580	0.88	-1.0
3,501,707	+		PFLU_RS15580	0.88	+1.7
3,501,707	+		PFLU_RS15580	0.88	-0.8
3,501,707	+		PFLU_RS15580	0.88	+0.3
3,501,707	+		PFLU_RS15580	0.88	-0.1
3,501,707	+		PFLU_RS15580	0.88	-0.9
3,501,707	+		PFLU_RS15580	0.88	+0.2
3,501,707	+		PFLU_RS15580	0.88	-0.2
3,501,707	+		PFLU_RS15580	0.88	+0.1
3,501,707	+		PFLU_RS15580	0.88	-0.3
3,501,707	+		PFLU_RS15580	0.88	-1.5
3,501,707	+		PFLU_RS15580	0.88	-0.2
3,501,707	+		PFLU_RS15580	0.88	-0.1
3,501,707	+		PFLU_RS15580	0.88	+0.9
3,501,707	+		PFLU_RS15580	0.88	+0.7
3,501,707	+		PFLU_RS15580	0.88	-0.5
3,501,707	+		PFLU_RS15580	0.88	-0.7
3,501,707	+		PFLU_RS15580	0.88	-1.7
3,501,707	+		PFLU_RS15580	0.88	+1.0
3,501,707	+		PFLU_RS15580	0.88	+0.4
3,501,707	+		PFLU_RS15580	0.88	+0.2
3,501,708	-		PFLU_RS15580	0.88	+0.5
3,501,708	-		PFLU_RS15580	0.88	+1.2
3,501,708	-		PFLU_RS15580	0.88	+1.8
3,501,708	-		PFLU_RS15580	0.88	-0.2
3,501,708	-		PFLU_RS15580	0.88	-2.2
3,501,708	-		PFLU_RS15580	0.88	-0.5
3,501,708	-		PFLU_RS15580	0.88	-1.2
3,501,708	-		PFLU_RS15580	0.88	+0.5
3,501,708	-		PFLU_RS15580	0.88	-1.0
3,501,708	-		PFLU_RS15580	0.88	-0.1
3,501,708	-		PFLU_RS15580	0.88	+0.5
3,501,708	-		PFLU_RS15580	0.88	-1.6
3,501,708	-		PFLU_RS15580	0.88	-1.2
3,501,708	-		PFLU_RS15580	0.88	+0.8
3,501,708	-		PFLU_RS15580	0.88	+0.5
3,501,708	-		PFLU_RS15580	0.88	+0.9
3,501,708	-		PFLU_RS15580	0.88	-0.3
3,501,708	-		PFLU_RS15580	0.88	-0.2
3,501,708	-		PFLU_RS15580	0.88	+0.3
3,501,708	-		PFLU_RS15580	0.88	-0.9
3,501,708	-		PFLU_RS15580	0.88	+2.3
3,501,708	-		PFLU_RS15580	0.88	+0.2
3,501,708	-		PFLU_RS15580	0.88	-0.1
3,501,708	-		PFLU_RS15580	0.88	-1.1
3,501,708	-		PFLU_RS15580	0.88	+0.3
3,501,708	-		PFLU_RS15580	0.88	+1.1
3,501,708	-		PFLU_RS15580	0.88	+0.0
3,501,741	+				+0.9
3,501,741	+				+0.2
3,501,741	+				+1.4
3,501,742	-				+0.5
3,501,742	-				+0.8
3,501,745	+				-0.7
3,501,745	+				+0.7
3,501,745	+				+1.5
3,501,745	+				-0.3
3,501,745	+				+0.3
3,501,745	+				+0.3
3,501,745	+				+0.8
3,501,745	+				-0.7
3,501,746	-				-0.1
3,501,746	-				-0.7
3,501,746	-				+0.3
3,501,746	-				+0.5
3,501,746	-				-0.3
3,501,746	-				-0.5
3,501,749	+				-0.7
3,501,749	+				+1.6
3,501,750	-				+1.3
3,501,750	-				-0.4
3,501,750	-				-0.7
3,501,805	+				+0.1
3,501,805	+				+1.2
3,501,806	-				+0.2
3,501,846	-				+0.3
3,501,847	+				+0.8
3,501,847	+				+0.9
3,501,847	+				-2.2
3,501,847	+				+0.6
3,501,847	+				+0.7
3,501,847	+				+1.9
3,501,847	+				+0.8
3,501,847	+				-0.1
3,501,848	-				-0.8
3,501,848	-				-0.7
3,501,848	-				-0.8
3,501,848	-				-0.5
3,501,848	-				-0.2
3,501,848	-				+0.3
3,501,848	-				-0.1
3,501,876	+				-0.3
3,501,876	+				+1.6
3,501,876	+				+0.1
3,501,877	-				-0.3
3,501,877	-				-2.2
3,501,933	+				-1.2
3,501,987	-		PFLU_RS15585	0.10	+1.2
3,502,240	+		PFLU_RS15585	0.24	-1.1
3,502,240	+		PFLU_RS15585	0.24	+0.0
3,502,241	-		PFLU_RS15585	0.24	-0.9
3,502,241	-		PFLU_RS15585	0.24	+0.5