Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13975

Experiment: Sucrose (C) and L-Glutamine (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with MOPS; with PEG
3,135,450	+		PFLU_RS13955	0.40	-0.1
3,135,450	+		PFLU_RS13955	0.40	+1.1
3,135,450	+		PFLU_RS13955	0.40	-0.2
3,135,450	+		PFLU_RS13955	0.40	+0.5
3,135,450	+		PFLU_RS13955	0.40	+1.2
3,135,450	+		PFLU_RS13955	0.40	+0.1
3,135,450	+		PFLU_RS13955	0.40	-0.6
3,135,450	+		PFLU_RS13955	0.40	+0.9
3,135,450	+		PFLU_RS13955	0.40	-0.3
3,135,450	+		PFLU_RS13955	0.40	-0.6
3,135,450	+		PFLU_RS13955	0.40	-0.5
3,135,450	+		PFLU_RS13955	0.40	-0.3
3,135,450	+		PFLU_RS13955	0.40	-1.6
3,135,451	-		PFLU_RS13955	0.41	-1.1
3,135,451	-		PFLU_RS13955	0.41	-0.1
3,135,451	-		PFLU_RS13955	0.41	+0.6
3,135,451	-		PFLU_RS13955	0.41	-0.9
3,135,451	-		PFLU_RS13955	0.41	+1.3
3,135,451	-		PFLU_RS13955	0.41	+1.5
3,135,451	-		PFLU_RS13955	0.41	-0.4
3,135,451	-		PFLU_RS13955	0.41	+1.2
3,135,507	+		PFLU_RS13955	0.67	-1.7
3,135,507	+		PFLU_RS13955	0.67	+0.6
3,135,507	+		PFLU_RS13955	0.67	-0.6
3,135,507	+		PFLU_RS13955	0.67	-0.9
3,135,508	-		PFLU_RS13955	0.67	-1.1
3,135,508	-		PFLU_RS13955	0.67	-1.2
3,135,636	+		PFLU_RS13960	0.32	+0.6
3,135,636	+		PFLU_RS13960	0.32	-0.4
3,135,930	+		PFLU_RS13965	0.65	-0.2
3,135,931	-		PFLU_RS13965	0.66	-0.6
3,135,931	-		PFLU_RS13965	0.66	-0.5
3,135,960	+		PFLU_RS13965	0.77	+0.1
3,135,960	+		PFLU_RS13965	0.77	-1.2
3,135,960	+		PFLU_RS13965	0.77	-0.4
3,135,961	-		PFLU_RS13965	0.78	-0.3
3,135,961	-		PFLU_RS13965	0.78	+1.7
3,135,961	-		PFLU_RS13965	0.78	+0.4
3,136,015	+				-0.4
3,136,015	+				+0.2
3,136,015	+				-0.1
3,136,016	-				+0.3
3,136,016	-				+0.9
3,136,016	-				-2.1
3,136,016	-				+1.3
3,136,016	-				+1.5
3,136,058	+				+0.3
3,136,058	+				+0.2
3,136,059	-				-0.7
3,136,059	-				-0.5
3,136,059	-				+1.2
3,136,059	-				+0.1
3,136,059	-				-1.5
3,136,059	-				+1.6
3,136,064	+				+0.9
3,136,064	+				+0.4
3,136,064	+				+1.3
3,136,064	+				+2.7
3,136,065	-				-0.2
3,136,065	-				+1.3
3,136,065	-				+0.3
3,136,065	-				-0.4
3,136,065	-				-0.5
3,136,065	-				+0.3
3,136,065	-				+1.2
3,136,065	-				-0.3
3,136,065	-				-0.5
3,136,065	-				+0.9
3,136,140	-		PFLU_RS13970	0.32	+0.3
3,136,158	+		PFLU_RS13970	0.41	-0.1
3,136,158	+		PFLU_RS13970	0.41	-1.4
3,136,158	+		PFLU_RS13970	0.41	-0.2
3,136,158	+		PFLU_RS13970	0.41	+0.1
3,136,159	-		PFLU_RS13970	0.41	+0.3
3,136,159	-		PFLU_RS13970	0.41	+0.3
3,136,159	-		PFLU_RS13970	0.41	+0.8
3,136,159	-		PFLU_RS13970	0.41	+0.8
3,136,159	-		PFLU_RS13970	0.41	-0.7
3,136,159	-		PFLU_RS13970	0.41	+1.9
3,136,159	-		PFLU_RS13970	0.41	+1.2
3,136,223	+		PFLU_RS13970	0.70	-0.2
3,136,235	+		PFLU_RS13970	0.75	-0.2
3,136,235	+		PFLU_RS13970	0.75	-0.8
3,136,235	+		PFLU_RS13970	0.75	+0.3
3,136,235	+		PFLU_RS13970	0.75	-0.1
3,136,235	+		PFLU_RS13970	0.75	-1.7
3,136,235	+		PFLU_RS13970	0.75	+0.5
3,136,235	+		PFLU_RS13970	0.75	-0.7
3,136,235	+		PFLU_RS13970	0.75	-0.2
3,136,235	+		PFLU_RS13970	0.75	-0.6
3,136,235	+		PFLU_RS13970	0.75	+0.5
3,136,235	+		PFLU_RS13970	0.75	+0.2
3,136,235	+		PFLU_RS13970	0.75	-0.7
3,136,235	+		PFLU_RS13970	0.75	-0.4
3,136,235	+		PFLU_RS13970	0.75	-0.2
3,136,235	+		PFLU_RS13970	0.75	+2.2
3,136,235	+		PFLU_RS13970	0.75	+0.0
3,136,235	+		PFLU_RS13970	0.75	+1.0
3,136,235	+		PFLU_RS13970	0.75	+0.0
3,136,235	+		PFLU_RS13970	0.75	+0.1
3,136,235	+		PFLU_RS13970	0.75	-1.6
3,136,235	+		PFLU_RS13970	0.75	+0.5
3,136,235	+		PFLU_RS13970	0.75	-0.2
3,136,235	+		PFLU_RS13970	0.75	-0.1
3,136,235	+		PFLU_RS13970	0.75	-0.2
3,136,235	+		PFLU_RS13970	0.75	-0.4
3,136,236	-		PFLU_RS13970	0.76	-0.6
3,136,236	-		PFLU_RS13970	0.76	-0.7
3,136,236	-		PFLU_RS13970	0.76	-0.2
3,136,236	-		PFLU_RS13970	0.76	+0.3
3,136,236	-		PFLU_RS13970	0.76	-0.7
3,136,236	-		PFLU_RS13970	0.76	+0.2
3,136,236	-		PFLU_RS13970	0.76	+0.3
3,136,236	-		PFLU_RS13970	0.76	-0.5
3,136,236	-		PFLU_RS13970	0.76	+0.1
3,136,236	-		PFLU_RS13970	0.76	+0.6
3,136,236	-		PFLU_RS13970	0.76	-0.0
3,136,236	-		PFLU_RS13970	0.76	+0.3
3,136,236	-		PFLU_RS13970	0.76	-1.3
3,136,236	-		PFLU_RS13970	0.76	-0.9
3,136,236	-		PFLU_RS13970	0.76	-2.8
3,136,236	-		PFLU_RS13970	0.76	-0.1
3,136,236	-		PFLU_RS13970	0.76	-0.4
3,136,236	-		PFLU_RS13970	0.76	-1.1
3,136,236	-		PFLU_RS13970	0.76	-1.8
3,136,236	-		PFLU_RS13970	0.76	-1.5
3,136,237	+		PFLU_RS13970	0.76	-2.5
3,136,237	+		PFLU_RS13970	0.76	-0.0
3,136,237	+		PFLU_RS13970	0.76	+0.2
3,136,238	-		PFLU_RS13970	0.77	-0.9
3,136,273	+				-1.5
3,136,274	-				+0.1
3,136,323	+				+0.8
3,136,364	+				-0.7
3,136,364	+				-2.2
3,136,365	-				-0.5
3,136,379	-				+0.3
3,136,450	+		PFLU_RS13975	0.12	-0.7
3,136,451	-		PFLU_RS13975	0.12	-1.8
3,136,470	+		PFLU_RS13975	0.15	-2.5
3,136,471	-		PFLU_RS13975	0.15	-0.4
3,136,723	+		PFLU_RS13975	0.57	+0.4
3,136,962	+				-0.9
3,136,962	+				-0.7
3,136,962	+				+0.0
3,136,963	-				+0.1
3,136,963	-				+0.8
3,136,963	-				-1.1
3,136,979	+				+0.1
3,136,979	+				+0.1
3,136,979	+				+0.4
3,136,980	-				+0.4
3,137,030	+				-0.7
3,137,030	+				+1.2
3,137,031	-				-0.5
3,137,037	+				-1.9
3,137,038	-				-1.4
3,137,100	+				-1.0
3,137,101	-				-2.1
3,137,101	-				+2.4
3,137,117	+				+0.5
3,137,126	+				+0.7
3,137,127	-				+0.7
3,137,127	-				-2.8
3,137,127	-				+0.6
3,137,156	+		PFLU_RS13980	0.12	-1.3
3,137,156	+		PFLU_RS13980	0.12	-0.2
3,137,156	+		PFLU_RS13980	0.12	-2.2
3,137,156	+		PFLU_RS13980	0.12	+0.2
3,137,156	+		PFLU_RS13980	0.12	+0.9
3,137,157	-		PFLU_RS13980	0.12	+1.0
3,137,271	+		PFLU_RS13980	0.20	-0.7
3,137,271	+		PFLU_RS13980	0.20	-0.3
3,137,271	+		PFLU_RS13980	0.20	+0.7
3,137,271	+		PFLU_RS13980	0.20	-2.7
3,137,272	-		PFLU_RS13980	0.20	-0.6
3,137,272	-		PFLU_RS13980	0.20	-0.5
3,137,272	-		PFLU_RS13980	0.20	-0.1
3,137,272	-		PFLU_RS13980	0.20	-0.7
3,137,272	-		PFLU_RS13980	0.20	+0.1
3,137,277	+		PFLU_RS13980	0.20	-0.4
3,137,368	-		PFLU_RS13980	0.26	+2.4
3,137,368	-		PFLU_RS13980	0.26	-0.5
3,137,553	+		PFLU_RS13980	0.38	-0.1
3,137,582	-		PFLU_RS13980	0.40	+0.2
3,137,597	-		PFLU_RS13980	0.41	+0.3
3,137,650	-		PFLU_RS13980	0.45	+0.1
3,137,697	+		PFLU_RS13980	0.48	-0.7
3,137,697	+		PFLU_RS13980	0.48	+1.2
3,137,698	-		PFLU_RS13980	0.48	+1.3
3,137,698	-		PFLU_RS13980	0.48	+0.6
3,137,710	+		PFLU_RS13980	0.49	-1.1
3,137,710	+		PFLU_RS13980	0.49	-0.9
3,137,710	+		PFLU_RS13980	0.49	-1.0
3,137,850	+		PFLU_RS13980	0.58	-0.7
3,137,850	+		PFLU_RS13980	0.58	+0.1
3,137,850	+		PFLU_RS13980	0.58	-2.1
3,137,850	+		PFLU_RS13980	0.58	+0.1
3,137,851	-		PFLU_RS13980	0.58	-0.8
3,137,851	-		PFLU_RS13980	0.58	-0.1
3,137,851	-		PFLU_RS13980	0.58	+0.4
3,137,853	+		PFLU_RS13980	0.59	-0.2
3,137,854	-		PFLU_RS13980	0.59	+0.3
3,137,854	-		PFLU_RS13980	0.59	-0.7
3,137,877	+		PFLU_RS13980	0.60	-0.9
3,137,877	+		PFLU_RS13980	0.60	-0.5
3,137,878	-		PFLU_RS13980	0.60	-1.8
3,137,878	-		PFLU_RS13980	0.60	+0.8