Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08190

Experiment: Sucrose (C) and L-Glutamine (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and L-Glutamine (N); with MOPS; with PEG
1,830,366	+		PFLU_RS08185	0.53	-1.2
1,830,366	+		PFLU_RS08185	0.53	-1.3
1,830,366	+		PFLU_RS08185	0.53	-1.4
1,830,366	+		PFLU_RS08185	0.53	-1.0
1,830,366	+		PFLU_RS08185	0.53	-1.0
1,830,366	+		PFLU_RS08185	0.53	+0.1
1,830,367	-		PFLU_RS08185	0.53	-0.1
1,830,367	-		PFLU_RS08185	0.53	-2.7
1,830,367	-		PFLU_RS08185	0.53	-2.7
1,830,367	-		PFLU_RS08185	0.53	-3.0
1,830,367	-		PFLU_RS08185	0.53	-0.1
1,830,367	-		PFLU_RS08185	0.53	-0.3
1,830,367	-		PFLU_RS08185	0.53	+0.1
1,830,368	+		PFLU_RS08185	0.53	+0.0
1,830,368	+		PFLU_RS08185	0.53	+1.2
1,830,368	+		PFLU_RS08185	0.53	-1.8
1,830,399	+		PFLU_RS08185	0.56	-2.2
1,830,400	-		PFLU_RS08185	0.56	-0.4
1,830,400	-		PFLU_RS08185	0.56	-1.0
1,830,400	-		PFLU_RS08185	0.56	-0.1
1,830,400	-		PFLU_RS08185	0.56	-1.2
1,830,484	+		PFLU_RS08185	0.63	+1.2
1,830,492	-		PFLU_RS08185	0.64	-1.4
1,830,506	+		PFLU_RS08185	0.65	-3.1
1,830,506	+		PFLU_RS08185	0.65	-0.3
1,830,506	+		PFLU_RS08185	0.65	-0.6
1,830,523	+		PFLU_RS08185	0.66	-1.1
1,830,524	-		PFLU_RS08185	0.67	-2.0
1,830,524	-		PFLU_RS08185	0.67	-1.5
1,830,602	+		PFLU_RS08185	0.73	+0.3
1,830,741	+		PFLU_RS08185	0.85	-1.1
1,830,765	-		PFLU_RS08185	0.87	-0.8
1,830,862	+				-0.1
1,830,893	+				+0.5
1,830,916	-				+0.3
1,830,923	+				+2.2
1,830,984	-				-1.2
1,831,000	-				-1.1
1,831,001	+				-1.5
1,831,001	+				+0.8
1,831,042	-				+0.2
1,831,102	-				-0.2
1,831,104	+				-1.2
1,831,105	-				-0.4
1,831,189	-				-1.8
1,831,202	+				+0.5
1,831,202	+				+0.5
1,831,202	+				-0.2
1,831,255	+				+0.7
1,831,255	+				+0.2
1,831,255	+				-0.7
1,831,255	+				+0.5
1,831,256	-				-0.6
1,831,256	-				-0.8
1,831,256	-				-1.5
1,831,256	-				-1.5
1,831,351	+				-2.2
1,831,352	-				-1.7
1,831,371	+				-2.1
1,831,371	+				-1.0
1,831,371	+				-0.1
1,831,372	-				-0.9
1,831,372	-				-0.4
1,831,372	-				-0.9
1,831,372	-				-1.2
1,831,375	+				+0.0
1,831,375	+				+0.9
1,831,375	+				-0.1
1,831,375	+				-1.2
1,831,375	+				+0.5
1,831,375	+				-1.5
1,831,375	+				+0.7
1,831,375	+				-1.3
1,831,375	+				-1.9
1,831,375	+				+0.3
1,831,375	+				-0.7
1,831,375	+				-1.7
1,831,375	+				-1.2
1,831,375	+				-2.5
1,831,376	-				-0.9
1,831,376	-				-2.7
1,831,376	-				-0.7
1,831,376	-				-0.9
1,831,376	-				+0.0
1,831,376	-				-1.5
1,831,376	-				+0.6
1,831,376	-				-0.4
1,831,376	-				-1.1
1,831,376	-				-0.8
1,831,376	-				-0.2
1,831,376	-				-2.1
1,831,376	-				-1.1
1,831,376	-				-2.2
1,831,376	-				+1.3
1,831,376	-				+1.9
1,831,447	+				-2.4
1,831,447	+				-0.2
1,831,447	+				-1.9
1,831,447	+				-1.1
1,831,447	+				-0.2
1,831,448	-				+0.7
1,831,448	-				+0.4
1,831,448	-				-0.7
1,831,526	+		PFLU_RS08190	0.11	-0.9
1,831,526	+		PFLU_RS08190	0.11	-0.1
1,831,527	-		PFLU_RS08190	0.11	-0.9
1,831,527	-		PFLU_RS08190	0.11	-1.7
1,831,538	-		PFLU_RS08190	0.11	+0.3
1,831,538	-		PFLU_RS08190	0.11	-1.0
1,831,544	+		PFLU_RS08190	0.12	+0.3
1,831,544	+		PFLU_RS08190	0.12	-0.9
1,831,545	-		PFLU_RS08190	0.12	-1.5
1,831,602	+		PFLU_RS08190	0.15	+0.9
1,831,619	+		PFLU_RS08190	0.15	-1.8
1,831,620	-		PFLU_RS08190	0.16	-1.9
1,831,625	+		PFLU_RS08190	0.16	-0.8
1,831,626	-		PFLU_RS08190	0.16	-1.9
1,831,630	+		PFLU_RS08190	0.16	-2.2
1,831,630	+		PFLU_RS08190	0.16	-2.0
1,831,631	-		PFLU_RS08190	0.16	-0.3
1,831,631	-		PFLU_RS08190	0.16	-0.4
1,831,631	-		PFLU_RS08190	0.16	-0.2
1,831,644	+		PFLU_RS08190	0.17	-0.8
1,831,644	+		PFLU_RS08190	0.17	-1.8
1,831,644	+		PFLU_RS08190	0.17	-1.5
1,831,644	+		PFLU_RS08190	0.17	-1.8
1,831,644	+		PFLU_RS08190	0.17	-2.5
1,831,644	+		PFLU_RS08190	0.17	-2.6
1,831,644	+		PFLU_RS08190	0.17	-1.0
1,831,644	+		PFLU_RS08190	0.17	-0.5
1,831,645	-		PFLU_RS08190	0.17	+0.3
1,831,645	-		PFLU_RS08190	0.17	-2.2
1,831,645	-		PFLU_RS08190	0.17	-0.1
1,831,666	+		PFLU_RS08190	0.18	-3.1
1,831,666	+		PFLU_RS08190	0.18	-0.1
1,831,667	-		PFLU_RS08190	0.18	-0.7
1,831,667	-		PFLU_RS08190	0.18	-0.5
1,831,667	-		PFLU_RS08190	0.18	-1.9
1,831,667	-		PFLU_RS08190	0.18	-0.8
1,831,667	-		PFLU_RS08190	0.18	-1.9
1,831,667	-		PFLU_RS08190	0.18	-1.5
1,831,667	-		PFLU_RS08190	0.18	+1.6
1,831,670	+		PFLU_RS08190	0.18	+0.3
1,831,670	+		PFLU_RS08190	0.18	-0.8
1,831,670	+		PFLU_RS08190	0.18	+1.1
1,831,671	-		PFLU_RS08190	0.18	-0.1
1,831,671	-		PFLU_RS08190	0.18	+0.2
1,831,671	-		PFLU_RS08190	0.18	-0.8
1,831,725	-		PFLU_RS08190	0.21	-0.9
1,831,731	+		PFLU_RS08190	0.21	-2.2
1,831,731	+		PFLU_RS08190	0.21	-0.9
1,831,797	+		PFLU_RS08190	0.24	+0.5
1,831,797	+		PFLU_RS08190	0.24	-0.1
1,831,797	+		PFLU_RS08190	0.24	-1.0
1,831,805	+		PFLU_RS08190	0.25	-0.7
1,831,805	+		PFLU_RS08190	0.25	-0.4
1,831,805	+		PFLU_RS08190	0.25	-1.6
1,831,805	+		PFLU_RS08190	0.25	-0.8
1,831,805	+		PFLU_RS08190	0.25	+0.7
1,831,805	+		PFLU_RS08190	0.25	-1.1
1,831,805	+		PFLU_RS08190	0.25	-1.2
1,831,805	+		PFLU_RS08190	0.25	+0.5
1,831,805	+		PFLU_RS08190	0.25	-1.0
1,831,805	+		PFLU_RS08190	0.25	-1.5
1,831,806	-		PFLU_RS08190	0.25	-0.7
1,831,806	-		PFLU_RS08190	0.25	-0.6
1,831,806	-		PFLU_RS08190	0.25	-2.2
1,831,806	-		PFLU_RS08190	0.25	+0.5
1,831,806	-		PFLU_RS08190	0.25	-1.4
1,831,806	-		PFLU_RS08190	0.25	-1.5
1,831,806	-		PFLU_RS08190	0.25	+0.7
1,831,806	-		PFLU_RS08190	0.25	-0.6
1,831,806	-		PFLU_RS08190	0.25	-2.2
1,831,806	-		PFLU_RS08190	0.25	-1.0
1,831,806	-		PFLU_RS08190	0.25	-1.8
1,831,806	-		PFLU_RS08190	0.25	+1.3
1,831,806	-		PFLU_RS08190	0.25	-1.4
1,831,806	-		PFLU_RS08190	0.25	-1.2
1,831,826	-		PFLU_RS08190	0.26	+0.4
1,831,932	-		PFLU_RS08190	0.31	-0.4
1,831,945	+		PFLU_RS08190	0.32	-1.1
1,831,946	-		PFLU_RS08190	0.32	-1.2
1,831,946	-		PFLU_RS08190	0.32	-2.3
1,831,946	-		PFLU_RS08190	0.32	-0.7
1,831,983	+		PFLU_RS08190	0.34	-1.4
1,831,984	-		PFLU_RS08190	0.34	-1.8
1,831,984	-		PFLU_RS08190	0.34	-0.5
1,831,984	-		PFLU_RS08190	0.34	+0.6
1,831,984	-		PFLU_RS08190	0.34	-0.1
1,831,984	-		PFLU_RS08190	0.34	-0.5
1,831,984	-		PFLU_RS08190	0.34	-0.4
1,831,984	-		PFLU_RS08190	0.34	-0.9
1,831,984	-		PFLU_RS08190	0.34	-0.6
1,831,986	+		PFLU_RS08190	0.34	-1.9
1,831,986	+		PFLU_RS08190	0.34	-1.4
1,831,987	-		PFLU_RS08190	0.34	-2.0
1,831,987	-		PFLU_RS08190	0.34	+0.8
1,831,987	-		PFLU_RS08190	0.34	-0.5
1,831,987	-		PFLU_RS08190	0.34	-1.4
1,831,987	-		PFLU_RS08190	0.34	-1.3
1,831,987	-		PFLU_RS08190	0.34	+1.3
1,831,987	-		PFLU_RS08190	0.34	-0.3
1,831,987	-		PFLU_RS08190	0.34	-1.1
1,831,989	+		PFLU_RS08190	0.34	+0.7
1,831,990	-		PFLU_RS08190	0.34	-1.5
1,831,990	-		PFLU_RS08190	0.34	+1.9
1,832,117	-		PFLU_RS08190	0.40	-1.5
1,832,117	-		PFLU_RS08190	0.40	-0.9
1,832,117	-		PFLU_RS08190	0.40	-0.8
1,832,131	+		PFLU_RS08190	0.41	-1.1
1,832,142	+		PFLU_RS08190	0.42	-1.9
1,832,142	+		PFLU_RS08190	0.42	-0.3
1,832,142	+		PFLU_RS08190	0.42	-0.8
1,832,142	+		PFLU_RS08190	0.42	-1.2
1,832,142	+		PFLU_RS08190	0.42	-1.2
1,832,143	-		PFLU_RS08190	0.42	-0.3
1,832,143	-		PFLU_RS08190	0.42	-1.2
1,832,181	+		PFLU_RS08190	0.44	-0.7
1,832,182	-		PFLU_RS08190	0.44	+0.3
1,832,191	+		PFLU_RS08190	0.44	-0.2
1,832,191	+		PFLU_RS08190	0.44	-1.2
1,832,191	+		PFLU_RS08190	0.44	+0.5
1,832,191	+		PFLU_RS08190	0.44	-1.2
1,832,192	-		PFLU_RS08190	0.44	-0.6
1,832,192	-		PFLU_RS08190	0.44	-0.6
1,832,192	-		PFLU_RS08190	0.44	+1.5
1,832,192	-		PFLU_RS08190	0.44	-0.2
1,832,192	-		PFLU_RS08190	0.44	-2.7
1,832,192	-		PFLU_RS08190	0.44	-1.7
1,832,192	-		PFLU_RS08190	0.44	-0.2
1,832,192	-		PFLU_RS08190	0.44	-1.5
1,832,192	-		PFLU_RS08190	0.44	-2.0
1,832,195	-		PFLU_RS08190	0.44	-2.8
1,832,195	-		PFLU_RS08190	0.44	-0.1
1,832,208	+		PFLU_RS08190	0.45	-0.8
1,832,208	+		PFLU_RS08190	0.45	+0.4
1,832,208	+		PFLU_RS08190	0.45	-1.4
1,832,209	-		PFLU_RS08190	0.45	-0.7
1,832,283	+		PFLU_RS08190	0.49	+0.5
1,832,283	+		PFLU_RS08190	0.49	-2.5
1,832,315	+		PFLU_RS08190	0.50	-0.7
1,832,395	-		PFLU_RS08190	0.54	-2.3
1,832,399	-		PFLU_RS08190	0.55	-0.8
1,832,405	-		PFLU_RS08190	0.55	+0.0
1,832,408	-		PFLU_RS08190	0.55	+0.1
1,832,439	+		PFLU_RS08190	0.57	-1.9
1,832,440	-		PFLU_RS08190	0.57	-1.0
1,832,444	-		PFLU_RS08190	0.57	-2.2
1,832,444	-		PFLU_RS08190	0.57	+0.3
1,832,475	+		PFLU_RS08190	0.58	-0.7
1,832,475	+		PFLU_RS08190	0.58	-0.8
1,832,475	+		PFLU_RS08190	0.58	-0.7
1,832,475	+		PFLU_RS08190	0.58	-1.5
1,832,475	+		PFLU_RS08190	0.58	-0.3
1,832,476	-		PFLU_RS08190	0.58	-0.1
1,832,479	+		PFLU_RS08190	0.59	-1.7
1,832,480	-		PFLU_RS08190	0.59	-0.1
1,832,480	-		PFLU_RS08190	0.59	-0.8
1,832,492	-		PFLU_RS08190	0.59	-1.4
1,832,492	-		PFLU_RS08190	0.59	+0.1
1,832,492	-		PFLU_RS08190	0.59	-0.8
1,832,569	+		PFLU_RS08190	0.63	-2.9
1,832,593	+		PFLU_RS08190	0.64	-2.4
1,832,593	+		PFLU_RS08190	0.64	-2.2
1,832,593	+		PFLU_RS08190	0.64	-0.1
1,832,652	+		PFLU_RS08190	0.67	-0.1
1,832,663	-		PFLU_RS08190	0.68	+0.1
1,832,663	-		PFLU_RS08190	0.68	-1.4
1,832,665	+		PFLU_RS08190	0.68	-2.4
1,832,706	+		PFLU_RS08190	0.70	+0.7
1,832,706	+		PFLU_RS08190	0.70	-0.9
1,832,707	-		PFLU_RS08190	0.70	-0.6
1,832,719	+		PFLU_RS08190	0.71	-2.2
1,832,720	-		PFLU_RS08190	0.71	+0.2
1,832,749	+		PFLU_RS08190	0.72	-2.8
1,832,757	+		PFLU_RS08190	0.73	-1.5
1,832,758	-		PFLU_RS08190	0.73	-1.5
1,832,775	+		PFLU_RS08190	0.73	-1.0
1,832,846	+		PFLU_RS08190	0.77	-3.0
1,833,045	+		PFLU_RS08190	0.87	-0.2
1,833,075	+		PFLU_RS08190	0.88	-0.1
1,833,075	+		PFLU_RS08190	0.88	-1.0
1,833,075	+		PFLU_RS08190	0.88	-1.0
1,833,075	+		PFLU_RS08190	0.88	-0.7
1,833,075	+		PFLU_RS08190	0.88	-0.4
1,833,076	-		PFLU_RS08190	0.89	-1.8
1,833,076	-		PFLU_RS08190	0.89	-2.6
1,833,078	+		PFLU_RS08190	0.89	+0.5
1,833,079	-		PFLU_RS08190	0.89	-1.9
1,833,079	-		PFLU_RS08190	0.89	-3.2
1,833,079	-		PFLU_RS08190	0.89	-3.7
1,833,093	+		PFLU_RS08190	0.89	-1.6
1,833,093	+		PFLU_RS08190	0.89	-2.2
1,833,093	+		PFLU_RS08190	0.89	-0.4
1,833,094	-		PFLU_RS08190	0.89	-1.9
1,833,094	-		PFLU_RS08190	0.89	-0.7
1,833,094	-		PFLU_RS08190	0.89	-0.9
1,833,177	+				-1.3
1,833,177	+				-0.8
1,833,178	-				-0.3
1,833,178	-				-1.8
1,833,178	-				+0.2
1,833,203	+				-0.9
1,833,204	-				-1.7
1,833,204	-				+0.9
1,833,204	-				-1.5
1,833,222	+				-0.6
1,833,222	+				-1.3
1,833,222	+				-0.1
1,833,223	-				-0.4
1,833,223	-				+0.3
1,833,223	-				+0.2
1,833,223	-				-0.9
1,833,278	+				-1.9
1,833,278	+				-2.1
1,833,278	+				+1.2
1,833,279	-				+0.3
1,833,307	+				-0.5
1,833,319	-				-0.7
1,833,353	+				+0.0
1,833,353	+				+0.7
1,833,353	+				+1.0
1,833,359	-				+1.1
1,833,428	-				-0.1
1,833,428	-				-1.9
1,833,428	-				-0.6
1,833,428	-				-0.1
1,833,428	-				+1.2
1,833,440	+				+1.4
1,833,440	+				-1.6
1,833,441	-				-0.5
1,833,745	+				+0.4
1,833,745	+				-1.1
1,833,745	+				+0.6
1,833,746	-				-0.1
1,833,746	-				+0.6
1,833,746	-				-0.2
1,833,753	+				+0.2
1,833,753	+				-0.2
1,833,753	+				-0.2
1,833,753	+				+0.3
1,833,753	+				-1.2
1,833,753	+				+0.2
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1,833,753	+				+0.2
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1,833,753	+				-0.6
1,833,753	+				+0.1
1,833,753	+				-0.7
1,833,754	-				-1.1
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1,833,754	-				-1.3
1,833,754	-				-0.4
1,833,754	-				-0.6
1,833,754	-				-1.1
1,833,754	-				-1.1
1,833,754	-				+0.7
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1,833,754	-				-0.2
1,833,754	-				+1.7
1,833,754	-				+0.9
1,833,973	+		PFLU_RS08200	0.35	-0.1
1,834,012	+		PFLU_RS08200	0.42	+1.2
1,834,012	+		PFLU_RS08200	0.42	+0.6
1,834,013	-		PFLU_RS08200	0.42	-0.6
1,834,075	+		PFLU_RS08200	0.53	-1.2
1,834,075	+		PFLU_RS08200	0.53	+0.3
1,834,076	-		PFLU_RS08200	0.53	-0.2
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1,834,079	+		PFLU_RS08200	0.54	+1.2
1,834,079	+		PFLU_RS08200	0.54	-0.7
1,834,079	+		PFLU_RS08200	0.54	+1.0
1,834,079	+		PFLU_RS08200	0.54	+0.7
1,834,079	+		PFLU_RS08200	0.54	+0.3
1,834,079	+		PFLU_RS08200	0.54	-0.9
1,834,079	+		PFLU_RS08200	0.54	+0.9
1,834,079	+		PFLU_RS08200	0.54	+0.5
1,834,079	+		PFLU_RS08200	0.54	-0.9
1,834,079	+		PFLU_RS08200	0.54	-0.2
1,834,079	+		PFLU_RS08200	0.54	+0.2
1,834,079	+		PFLU_RS08200	0.54	-0.1
1,834,079	+		PFLU_RS08200	0.54	-1.1
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1,834,080	-		PFLU_RS08200	0.54	+0.7
1,834,080	-		PFLU_RS08200	0.54	-0.7
1,834,080	-		PFLU_RS08200	0.54	+0.5
1,834,080	-		PFLU_RS08200	0.54	-0.8
1,834,080	-		PFLU_RS08200	0.54	-1.9
1,834,080	-		PFLU_RS08200	0.54	-1.1
1,834,080	-		PFLU_RS08200	0.54	+0.9
1,834,080	-		PFLU_RS08200	0.54	-1.0
1,834,080	-		PFLU_RS08200	0.54	-0.5
1,834,080	-		PFLU_RS08200	0.54	+0.4
1,834,080	-		PFLU_RS08200	0.54	+0.0
1,834,080	-		PFLU_RS08200	0.54	-0.8
1,834,080	-		PFLU_RS08200	0.54	+0.4
1,834,080	-		PFLU_RS08200	0.54	+0.3
1,834,080	-		PFLU_RS08200	0.54	+1.0
1,834,080	-		PFLU_RS08200	0.54	+1.2
1,834,080	-		PFLU_RS08200	0.54	+0.2
1,834,080	-		PFLU_RS08200	0.54	-0.1
1,834,080	-		PFLU_RS08200	0.54	+2.7
1,834,080	-		PFLU_RS08200	0.54	-0.3
1,834,080	-		PFLU_RS08200	0.54	-0.8
1,834,205	+		PFLU_RS08200	0.75	-0.2
1,834,285	+		PFLU_RS08200	0.89	+0.3