Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006529

Experiment: RCH2_defined_glucose_5mM with Shikimic Acid 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Shikimic Acid 5 mM
2,921,513	+		ABIE53_006527	0.54	-1.3
2,921,596	+		ABIE53_006527	0.67	+1.4
2,921,706	+		ABIE53_006527	0.83	+0.3
2,921,707	-		ABIE53_006527	0.84	+0.0
2,921,707	-		ABIE53_006527	0.84	-1.0
2,921,724	+		ABIE53_006527	0.86	-0.6
2,921,724	+		ABIE53_006527	0.86	-0.3
2,921,724	+		ABIE53_006527	0.86	+0.0
2,921,725	-		ABIE53_006527	0.86	+0.0
2,921,725	-		ABIE53_006527	0.86	-0.6
2,921,745	+		ABIE53_006527	0.89	-1.3
2,921,745	+		ABIE53_006527	0.89	-0.7
2,921,745	+		ABIE53_006527	0.89	+2.6
2,921,745	+		ABIE53_006527	0.89	+1.0
2,921,746	-		ABIE53_006527	0.90	+1.8
2,921,746	-		ABIE53_006527	0.90	+2.2
2,922,006	+		ABIE53_006528	0.26	-0.9
2,922,006	+		ABIE53_006528	0.26	-0.2
2,922,007	-		ABIE53_006528	0.26	+0.5
2,922,007	-		ABIE53_006528	0.26	-0.7
2,922,016	+		ABIE53_006528	0.28	-0.0
2,922,016	+		ABIE53_006528	0.28	+0.0
2,922,057	+		ABIE53_006528	0.34	+0.4
2,922,060	+		ABIE53_006528	0.34	-0.3
2,922,060	+		ABIE53_006528	0.34	-0.3
2,922,420	+		ABIE53_006528	0.89	-1.2
2,922,493	-				+0.2
2,922,493	-				-0.1
2,922,734	+		ABIE53_006529	0.25	+0.8
2,922,735	-		ABIE53_006529	0.26	-0.3
2,922,735	-		ABIE53_006529	0.26	-0.1
2,922,776	+		ABIE53_006529	0.30	+1.2
2,922,848	-		ABIE53_006529	0.38	-1.6
2,922,871	-		ABIE53_006529	0.41	-1.9
2,922,912	+		ABIE53_006529	0.46	-1.5
2,922,912	+		ABIE53_006529	0.46	+1.2
2,922,913	-		ABIE53_006529	0.46	-0.6
2,923,131	+		ABIE53_006529	0.71	+1.8
2,923,132	-		ABIE53_006529	0.71	+1.3
2,923,322	+				+0.4
2,923,380	+				-1.4
2,923,380	+				+0.2
2,923,380	+				-0.1
2,923,380	+				+0.7
2,923,381	-				+0.6
2,923,803	-		ABIE53_006530	0.45	-0.8
2,923,803	-		ABIE53_006530	0.45	+1.8
2,923,809	-		ABIE53_006530	0.46	-0.8
2,923,809	-		ABIE53_006530	0.46	-0.5
2,923,851	+		ABIE53_006530	0.51	-2.0
2,923,946	+		ABIE53_006530	0.63	-1.0
2,923,947	-		ABIE53_006530	0.63	+0.5
2,924,012	+		ABIE53_006530	0.71	+0.8
2,924,013	-		ABIE53_006530	0.71	-1.0
2,924,013	-		ABIE53_006530	0.71	-0.3
2,924,050	+		ABIE53_006530	0.76	+0.8
2,924,258	+				-0.8
2,924,261	-				+0.0