Experiment: MoYLS4 with Glycerol 50mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2837 and DVU2838 are separated by 71 nucleotides DVU2838 and DVU2839 are separated by 0 nucleotides DVU2839 and DVU2840 are separated by 108 nucleotides
DVU2837: DVU2837 - conserved hypothetical protein (TIGR), at 2,941,168 to 2,942,241
DVU2837
DVU2838: DVU2838 - conserved hypothetical protein (TIGR), at 2,942,313 to 2,943,650
DVU2838
DVU2839: DVU2839 - conserved hypothetical protein (TIGR), at 2,943,651 to 2,944,175
DVU2839
DVU2840: DVU2840 - conserved hypothetical protein (TIGR), at 2,944,284 to 2,944,985
DVU2840
Position (kb)
2942
2943
2944 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2941.357 kb on + strand, within DVU2837 at 2941.418 kb on + strand, within DVU2837 at 2941.542 kb on + strand, within DVU2837 at 2941.550 kb on - strand, within DVU2837 at 2941.550 kb on - strand, within DVU2837 at 2941.550 kb on - strand, within DVU2837 at 2941.615 kb on - strand, within DVU2837 at 2941.615 kb on - strand, within DVU2837 at 2941.656 kb on + strand, within DVU2837 at 2941.704 kb on + strand, within DVU2837 at 2941.767 kb on + strand, within DVU2837 at 2941.776 kb on + strand, within DVU2837 at 2941.776 kb on + strand, within DVU2837 at 2941.776 kb on + strand, within DVU2837 at 2941.776 kb on + strand, within DVU2837 at 2941.784 kb on - strand, within DVU2837 at 2941.784 kb on - strand, within DVU2837 at 2941.810 kb on - strand, within DVU2837 at 2941.820 kb on - strand, within DVU2837 at 2941.831 kb on - strand, within DVU2837 at 2941.892 kb on - strand, within DVU2837 at 2941.892 kb on - strand, within DVU2837 at 2941.923 kb on + strand, within DVU2837 at 2941.923 kb on + strand, within DVU2837 at 2942.084 kb on - strand, within DVU2837 at 2942.414 kb on - strand at 2942.929 kb on + strand, within DVU2838 at 2943.142 kb on + strand, within DVU2838 at 2943.218 kb on + strand, within DVU2838 at 2943.218 kb on + strand, within DVU2838 at 2943.226 kb on - strand, within DVU2838 at 2943.278 kb on + strand, within DVU2838 at 2943.286 kb on - strand, within DVU2838 at 2943.307 kb on + strand, within DVU2838 at 2943.529 kb on - strand at 2943.595 kb on - strand at 2943.709 kb on + strand, within DVU2839 at 2943.988 kb on + strand, within DVU2839 at 2944.091 kb on + strand, within DVU2839 at 2944.112 kb on + strand, within DVU2839
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Glycerol 50mM remove 2,941,357 + DVU2837 0.18 +2.2 2,941,418 + DVU2837 0.23 +1.5 2,941,542 + DVU2837 0.35 +1.6 2,941,550 - DVU2837 0.36 +0.2 2,941,550 - DVU2837 0.36 +0.4 2,941,550 - DVU2837 0.36 +0.6 2,941,615 - DVU2837 0.42 -0.5 2,941,615 - DVU2837 0.42 -0.1 2,941,656 + DVU2837 0.45 -0.2 2,941,704 + DVU2837 0.50 -1.8 2,941,767 + DVU2837 0.56 -0.8 2,941,776 + DVU2837 0.57 -0.5 2,941,776 + DVU2837 0.57 +1.0 2,941,776 + DVU2837 0.57 -0.1 2,941,776 + DVU2837 0.57 -0.3 2,941,784 - DVU2837 0.57 +0.1 2,941,784 - DVU2837 0.57 -0.1 2,941,810 - DVU2837 0.60 -0.8 2,941,820 - DVU2837 0.61 -1.9 2,941,831 - DVU2837 0.62 -0.7 2,941,892 - DVU2837 0.67 -1.2 2,941,892 - DVU2837 0.67 +1.8 2,941,923 + DVU2837 0.70 -0.1 2,941,923 + DVU2837 0.70 -0.3 2,942,084 - DVU2837 0.85 -1.1 2,942,414 - +2.8 2,942,929 + DVU2838 0.46 +0.9 2,943,142 + DVU2838 0.62 +0.9 2,943,218 + DVU2838 0.68 -0.1 2,943,218 + DVU2838 0.68 -0.1 2,943,226 - DVU2838 0.68 +1.8 2,943,278 + DVU2838 0.72 +0.5 2,943,286 - DVU2838 0.73 +0.8 2,943,307 + DVU2838 0.74 +0.2 2,943,529 - +0.8 2,943,595 - +0.1 2,943,709 + DVU2839 0.11 -0.3 2,943,988 + DVU2839 0.64 -0.3 2,944,091 + DVU2839 0.84 +0.1 2,944,112 + DVU2839 0.88 +0.1
Or see this region's nucleotide sequence