Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18255

Experiment: Carbon source Phenylacetic 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Phenylacetic 2.5 mM
3,955,638	+		RR42_RS18250	0.17	-1.6
3,956,037	+		RR42_RS18250	0.68	-1.1
3,956,049	+		RR42_RS18250	0.70	-1.5
3,956,049	+		RR42_RS18250	0.70	-1.8
3,956,049	+		RR42_RS18250	0.70	-1.2
3,956,049	+		RR42_RS18250	0.70	-2.0
3,956,049	+		RR42_RS18250	0.70	+0.4
3,956,050	-		RR42_RS18250	0.70	-1.9
3,956,050	-		RR42_RS18250	0.70	-2.3
3,956,059	+		RR42_RS18250	0.71	-1.1
3,956,059	+		RR42_RS18250	0.71	-1.1
3,956,059	+		RR42_RS18250	0.71	-2.6
3,956,060	-		RR42_RS18250	0.71	+0.4
3,956,060	-		RR42_RS18250	0.71	-1.6
3,956,060	-		RR42_RS18250	0.71	-0.9
3,956,060	-		RR42_RS18250	0.71	-1.8
3,956,060	-		RR42_RS18250	0.71	-0.3
3,956,060	-		RR42_RS18250	0.71	-0.2
3,956,060	-		RR42_RS18250	0.71	-0.9
3,956,060	-		RR42_RS18250	0.71	-2.2
3,956,060	-		RR42_RS18250	0.71	-0.5
3,956,061	+		RR42_RS18250	0.71	-1.7
3,956,061	+		RR42_RS18250	0.71	-0.7
3,956,061	+		RR42_RS18250	0.71	-1.1
3,956,061	+		RR42_RS18250	0.71	-1.1
3,956,061	+		RR42_RS18250	0.71	-1.4
3,956,061	+		RR42_RS18250	0.71	-0.5
3,956,062	-		RR42_RS18250	0.71	-0.8
3,956,062	-		RR42_RS18250	0.71	-1.8
3,956,062	-		RR42_RS18250	0.71	-1.3
3,956,062	-		RR42_RS18250	0.71	-0.1
3,956,062	-		RR42_RS18250	0.71	+0.8
3,956,062	-		RR42_RS18250	0.71	-1.9
3,956,062	-		RR42_RS18250	0.71	-2.1
3,956,062	-		RR42_RS18250	0.71	+0.1
3,956,067	+		RR42_RS18250	0.72	-1.2
3,956,067	+		RR42_RS18250	0.72	-2.9
3,956,067	+		RR42_RS18250	0.72	-2.6
3,956,068	-		RR42_RS18250	0.72	-2.1
3,956,068	-		RR42_RS18250	0.72	-1.0
3,956,201	-		RR42_RS18250	0.89	-1.4
3,956,277	+				-3.0
3,956,277	+				-0.2
3,956,278	-				+1.1
3,956,353	-				-0.0
3,956,375	+				-0.4
3,956,428	+				-1.5
3,956,428	+				-1.8
3,956,428	+				-0.8
3,956,428	+				-0.4
3,956,428	+				-0.5
3,956,429	-				-1.4
3,956,429	-				+0.8
3,956,430	+				+0.1
3,956,430	+				-0.2
3,956,430	+				-2.0
3,956,430	+				-2.3
3,956,430	+				-1.1
3,956,431	-				-0.3
3,956,431	-				-0.2
3,956,431	-				-0.5
3,956,431	-				+0.6
3,956,431	-				-0.0
3,956,431	-				+0.4
3,956,431	-				+0.7
3,956,431	-				+0.3
3,956,431	-				-0.6
3,956,432	+				-1.2
3,956,432	+				-0.1
3,956,432	+				-1.4
3,956,432	+				-0.5
3,956,432	+				+0.7
3,956,432	+				-1.0
3,956,432	+				-0.7
3,956,432	+				-0.7
3,956,432	+				+0.2
3,956,433	-				+0.6
3,956,433	-				-2.3
3,956,433	-				-0.2
3,956,433	-				+0.7
3,956,433	-				+0.8
3,956,434	+				+0.5
3,956,434	+				-0.2
3,956,434	+				+0.4
3,956,434	+				-1.2
3,956,434	+				-0.3
3,956,435	-				-0.3
3,956,435	-				+1.8
3,956,435	-				-0.4
3,956,435	-				-0.5
3,956,435	-				+0.2
3,956,435	-				+1.5
3,956,435	-				+0.7
3,956,435	-				-0.7
3,956,435	-				+0.2
3,956,435	-				+0.8
3,956,435	-				-0.6
3,956,458	+				-2.5
3,956,458	+				-0.8
3,956,458	+				-0.5
3,956,458	+				-0.7
3,956,458	+				-2.1
3,956,459	-				+1.0
3,956,593	+				-0.1
3,956,593	+				+0.2
3,956,593	+				-1.4
3,956,594	-				-0.3
3,956,594	-				-0.3
3,956,594	-				+0.2
3,956,594	-				-0.5
3,956,599	+				+0.9
3,956,622	+		RR42_RS18255	0.12	+0.2
3,956,623	-		RR42_RS18255	0.12	-1.5
3,956,623	-		RR42_RS18255	0.12	+2.8
3,956,623	-		RR42_RS18255	0.12	+0.8
3,957,161	+		RR42_RS18255	0.82	-1.4
3,957,161	+		RR42_RS18255	0.82	-1.0
3,957,162	-		RR42_RS18255	0.82	+0.1
3,957,162	-		RR42_RS18255	0.82	+0.4
3,957,409	+		RR42_RS18260	0.11	+0.8
3,957,409	+		RR42_RS18260	0.11	+1.6
3,957,409	+		RR42_RS18260	0.11	+0.2
3,957,410	-		RR42_RS18260	0.11	-0.4
3,957,410	-		RR42_RS18260	0.11	+0.0
3,957,410	-		RR42_RS18260	0.11	+0.5
3,957,410	-		RR42_RS18260	0.11	-0.5
3,957,410	-		RR42_RS18260	0.11	-0.0
3,957,588	+		RR42_RS18260	0.51	+1.0
3,957,589	-		RR42_RS18260	0.51	-0.7
3,957,589	-		RR42_RS18260	0.51	+0.2
3,957,589	-		RR42_RS18260	0.51	+1.8
3,957,594	+		RR42_RS18260	0.52	-0.4
3,957,594	+		RR42_RS18260	0.52	-0.7
3,957,595	-		RR42_RS18260	0.52	-0.2
3,957,700	+		RR42_RS18260	0.76	-0.5
3,957,700	+		RR42_RS18260	0.76	-1.6
3,957,700	+		RR42_RS18260	0.76	-2.0
3,957,700	+		RR42_RS18260	0.76	+0.9
3,957,700	+		RR42_RS18260	0.76	-0.0
3,957,700	+		RR42_RS18260	0.76	+0.3
3,957,701	-		RR42_RS18260	0.76	+0.3
3,957,701	-		RR42_RS18260	0.76	-0.0
3,957,701	-		RR42_RS18260	0.76	+0.1
3,957,701	-		RR42_RS18260	0.76	-0.5
3,957,701	-		RR42_RS18260	0.76	+0.6
3,957,701	-		RR42_RS18260	0.76	+0.4
3,957,701	-		RR42_RS18260	0.76	+0.9
3,957,701	-		RR42_RS18260	0.76	+0.3
3,957,701	-		RR42_RS18260	0.76	-0.2
3,957,701	-		RR42_RS18260	0.76	+0.1
3,957,825	+				-0.4
3,957,825	+				-0.1
3,957,825	+				+0.1
3,957,826	-				-0.1
3,957,826	-				-0.1
3,957,831	+				+0.2
3,957,831	+				-0.7
3,957,831	+				+0.8
3,957,831	+				-0.2
3,957,831	+				-0.9
3,957,832	-				-1.2
3,957,832	-				+0.8
3,957,832	-				-0.3
3,957,843	+				+0.0
3,957,844	-				-0.5
3,957,844	-				+0.6
3,957,844	-				-0.0
3,957,844	-				-0.9
3,957,844	-				+0.0
3,957,970	+				-1.7
3,957,971	-				+0.8
3,957,971	-				-0.0
3,957,988	+				-0.2
3,957,988	+				+0.9
3,957,989	-				-0.2
3,958,089	+		RR42_RS18265	0.17	-0.9
3,958,089	+		RR42_RS18265	0.17	+0.3
3,958,089	+		RR42_RS18265	0.17	+0.6
3,958,089	+		RR42_RS18265	0.17	+1.4
3,958,089	+		RR42_RS18265	0.17	+0.8
3,958,090	-		RR42_RS18265	0.17	+0.6
3,958,090	-		RR42_RS18265	0.17	-1.4
3,958,093	+		RR42_RS18265	0.18	-1.0
3,958,183	+		RR42_RS18265	0.24	-1.0
3,958,184	-		RR42_RS18265	0.25	+0.2
3,958,269	+		RR42_RS18265	0.31	+0.8
3,958,269	+		RR42_RS18265	0.31	-0.4
3,958,270	-		RR42_RS18265	0.31	-0.1
3,958,270	-		RR42_RS18265	0.31	-1.0
3,958,276	+		RR42_RS18265	0.32	+0.2
3,958,282	+		RR42_RS18265	0.32	-4.3
3,958,293	+		RR42_RS18265	0.33	+0.5
3,958,294	-		RR42_RS18265	0.33	-0.1
3,958,294	-		RR42_RS18265	0.33	+0.9