Experiment: Recovery broth with Norfloxacin 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BBR_RS15640 and BBR_RS15645 are separated by 139 nucleotides BBR_RS15645 and BBR_RS15650 are separated by 5 nucleotides BBR_RS15650 and BBR_RS15655 are separated by 43 nucleotides BBR_RS15655 and BBR_RS15660 overlap by 1 nucleotides
BBR_RS15640: BBR_RS15640 - HIT domain-containing protein, at 1,280,385 to 1,280,969
_RS15640
BBR_RS15645: BBR_RS15645 - YebC/PmpR family DNA-binding transcriptional regulator, at 1,281,109 to 1,281,864
_RS15645
BBR_RS15650: BBR_RS15650 - Holliday junction resolvase, at 1,281,870 to 1,282,454
_RS15650
BBR_RS15655: BBR_RS15655 - Holliday junction branch migration protein RuvA, at 1,282,498 to 1,283,124
_RS15655
BBR_RS15660: BBR_RS15660 - Holliday junction branch migration DNA helicase RuvB, at 1,283,124 to 1,284,188
_RS15660
Position (kb) 1281
1282
1283 Strain fitness (log2 ratio) -1
0
1
2 at 1282.175 kb on + strand, within BBR_RS15650 at 1282.178 kb on - strand, within BBR_RS15650 at 1282.280 kb on - strand, within BBR_RS15650 at 1282.315 kb on - strand, within BBR_RS15650 at 1282.331 kb on + strand, within BBR_RS15650 at 1282.397 kb on + strand at 1282.405 kb on - strand at 1282.480 kb on + strand at 1282.587 kb on - strand, within BBR_RS15655 at 1282.657 kb on - strand, within BBR_RS15655 at 1282.668 kb on + strand, within BBR_RS15655 at 1282.719 kb on + strand, within BBR_RS15655 at 1282.783 kb on - strand, within BBR_RS15655 at 1282.824 kb on + strand, within BBR_RS15655 at 1282.824 kb on + strand, within BBR_RS15655 at 1282.824 kb on + strand, within BBR_RS15655 at 1282.824 kb on + strand, within BBR_RS15655 at 1282.933 kb on + strand, within BBR_RS15655 at 1282.963 kb on - strand, within BBR_RS15655 at 1282.963 kb on - strand, within BBR_RS15655 at 1282.963 kb on - strand, within BBR_RS15655 at 1283.011 kb on + strand, within BBR_RS15655 at 1283.023 kb on + strand, within BBR_RS15655 at 1283.120 kb on + strand at 1283.134 kb on - strand at 1283.267 kb on + strand, within BBR_RS15660 at 1283.423 kb on + strand, within BBR_RS15660 at 1283.444 kb on - strand, within BBR_RS15660 at 1283.448 kb on + strand, within BBR_RS15660
Per-strain Table
Position Strand Gene LocusTag Fraction Recovery broth with Norfloxacin 0.2 mM remove 1,282,175 + BBR_RS15650 0.52 +0.0 1,282,178 - BBR_RS15650 0.53 -1.0 1,282,280 - BBR_RS15650 0.70 +0.9 1,282,315 - BBR_RS15650 0.76 +0.1 1,282,331 + BBR_RS15650 0.79 -0.8 1,282,397 + -0.2 1,282,405 - -1.1 1,282,480 + +0.7 1,282,587 - BBR_RS15655 0.14 -1.1 1,282,657 - BBR_RS15655 0.25 +0.5 1,282,668 + BBR_RS15655 0.27 -1.4 1,282,719 + BBR_RS15655 0.35 -1.3 1,282,783 - BBR_RS15655 0.45 -0.9 1,282,824 + BBR_RS15655 0.52 +0.4 1,282,824 + BBR_RS15655 0.52 +1.1 1,282,824 + BBR_RS15655 0.52 -0.2 1,282,824 + BBR_RS15655 0.52 -0.5 1,282,933 + BBR_RS15655 0.69 +0.1 1,282,963 - BBR_RS15655 0.74 +0.1 1,282,963 - BBR_RS15655 0.74 +0.2 1,282,963 - BBR_RS15655 0.74 +0.8 1,283,011 + BBR_RS15655 0.82 +2.1 1,283,023 + BBR_RS15655 0.84 +0.5 1,283,120 + -0.2 1,283,134 - +0.4 1,283,267 + BBR_RS15660 0.13 +0.1 1,283,423 + BBR_RS15660 0.28 -1.4 1,283,444 - BBR_RS15660 0.30 +0.4 1,283,448 + BBR_RS15660 0.30 -0.6
Or see this region's nucleotide sequence