Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13570

Experiment: Sucrose (C) and Glycine betaine (N); with TAPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with TAPS; with PEG
3,070,819	-				+0.9
3,070,819	-				-1.5
3,070,895	-				-0.5
3,070,904	-				-0.1
3,070,904	-				-0.1
3,070,904	-				-1.4
3,070,904	-				+0.3
3,070,936	+				+0.0
3,070,996	-				-0.8
3,071,012	+				+1.2
3,071,012	+				-0.4
3,071,012	+				+0.7
3,071,012	+				+1.1
3,071,013	-				-0.3
3,071,013	-				+0.7
3,071,013	-				+0.2
3,071,013	-				-0.8
3,071,063	+		PFLU_RS13565	0.15	+0.4
3,071,063	+		PFLU_RS13565	0.15	-0.2
3,071,064	-		PFLU_RS13565	0.15	-0.2
3,071,232	+		PFLU_RS13565	0.39	+1.6
3,071,232	+		PFLU_RS13565	0.39	+0.0
3,071,232	+		PFLU_RS13565	0.39	-0.3
3,071,232	+		PFLU_RS13565	0.39	-0.6
3,071,232	+		PFLU_RS13565	0.39	-1.4
3,071,232	+		PFLU_RS13565	0.39	+0.5
3,071,232	+		PFLU_RS13565	0.39	+0.2
3,071,233	-		PFLU_RS13565	0.39	-0.7
3,071,233	-		PFLU_RS13565	0.39	-1.1
3,071,233	-		PFLU_RS13565	0.39	+0.0
3,071,233	-		PFLU_RS13565	0.39	-0.1
3,071,233	-		PFLU_RS13565	0.39	-0.2
3,071,234	+		PFLU_RS13565	0.39	+0.3
3,071,234	+		PFLU_RS13565	0.39	+0.7
3,071,234	+		PFLU_RS13565	0.39	-0.7
3,071,234	+		PFLU_RS13565	0.39	+0.2
3,071,234	+		PFLU_RS13565	0.39	+1.8
3,071,234	+		PFLU_RS13565	0.39	+3.4
3,071,235	-		PFLU_RS13565	0.39	-0.3
3,071,235	-		PFLU_RS13565	0.39	-1.5
3,071,235	-		PFLU_RS13565	0.39	-0.2
3,071,235	-		PFLU_RS13565	0.39	-1.0
3,071,235	-		PFLU_RS13565	0.39	-2.2
3,071,235	-		PFLU_RS13565	0.39	-1.5
3,071,235	-		PFLU_RS13565	0.39	+0.2
3,071,235	-		PFLU_RS13565	0.39	-0.5
3,071,235	-		PFLU_RS13565	0.39	-0.5
3,071,235	-		PFLU_RS13565	0.39	-0.3
3,071,235	-		PFLU_RS13565	0.39	-1.0
3,071,235	-		PFLU_RS13565	0.39	-1.2
3,071,235	-		PFLU_RS13565	0.39	+0.5
3,071,235	-		PFLU_RS13565	0.39	-0.3
3,071,282	+		PFLU_RS13565	0.46	+0.2
3,071,282	+		PFLU_RS13565	0.46	-0.5
3,071,282	+		PFLU_RS13565	0.46	+0.2
3,071,282	+		PFLU_RS13565	0.46	-0.3
3,071,282	+		PFLU_RS13565	0.46	+0.2
3,071,282	+		PFLU_RS13565	0.46	-1.3
3,071,282	+		PFLU_RS13565	0.46	-1.7
3,071,282	+		PFLU_RS13565	0.46	-1.6
3,071,282	+		PFLU_RS13565	0.46	+0.4
3,071,282	+		PFLU_RS13565	0.46	+1.0
3,071,283	-		PFLU_RS13565	0.46	+0.2
3,071,283	-		PFLU_RS13565	0.46	+0.2
3,071,283	-		PFLU_RS13565	0.46	-0.7
3,071,283	-		PFLU_RS13565	0.46	+0.5
3,071,283	-		PFLU_RS13565	0.46	+0.9
3,071,283	-		PFLU_RS13565	0.46	-1.0
3,071,283	-		PFLU_RS13565	0.46	-0.3
3,071,283	-		PFLU_RS13565	0.46	-0.0
3,071,283	-		PFLU_RS13565	0.46	-1.4
3,071,283	-		PFLU_RS13565	0.46	-0.4
3,071,283	-		PFLU_RS13565	0.46	-0.3
3,071,384	+		PFLU_RS13565	0.60	-1.2
3,071,384	+		PFLU_RS13565	0.60	-0.3
3,071,384	+		PFLU_RS13565	0.60	-1.3
3,071,384	+		PFLU_RS13565	0.60	+0.6
3,071,384	+		PFLU_RS13565	0.60	+1.6
3,071,385	-		PFLU_RS13565	0.60	-1.4
3,071,385	-		PFLU_RS13565	0.60	+0.7
3,071,385	-		PFLU_RS13565	0.60	+0.8
3,071,385	-		PFLU_RS13565	0.60	+1.1
3,071,385	-		PFLU_RS13565	0.60	+0.1
3,071,390	+		PFLU_RS13565	0.61	-1.6
3,071,390	+		PFLU_RS13565	0.61	-1.0
3,071,390	+		PFLU_RS13565	0.61	-0.2
3,071,390	+		PFLU_RS13565	0.61	+1.2
3,071,391	-		PFLU_RS13565	0.61	-0.5
3,071,391	-		PFLU_RS13565	0.61	+0.2
3,071,391	-		PFLU_RS13565	0.61	+1.5
3,071,391	-		PFLU_RS13565	0.61	-1.5
3,071,391	-		PFLU_RS13565	0.61	+0.2
3,071,391	-		PFLU_RS13565	0.61	-0.5
3,071,391	-		PFLU_RS13565	0.61	-0.1
3,071,391	-		PFLU_RS13565	0.61	-0.4
3,071,394	+		PFLU_RS13565	0.61	+0.3
3,071,395	-		PFLU_RS13565	0.62	-0.2
3,071,395	-		PFLU_RS13565	0.62	+0.6
3,071,395	-		PFLU_RS13565	0.62	-0.9
3,071,395	-		PFLU_RS13565	0.62	+0.3
3,071,395	-		PFLU_RS13565	0.62	+1.3
3,071,395	-		PFLU_RS13565	0.62	+0.5
3,071,409	+		PFLU_RS13565	0.63	+0.3
3,071,409	+		PFLU_RS13565	0.63	+0.2
3,071,410	-		PFLU_RS13565	0.64	+1.6
3,071,417	+		PFLU_RS13565	0.65	+0.3
3,071,417	+		PFLU_RS13565	0.65	-1.2
3,071,417	+		PFLU_RS13565	0.65	+0.2
3,071,417	+		PFLU_RS13565	0.65	-0.7
3,071,417	+		PFLU_RS13565	0.65	-1.2
3,071,417	+		PFLU_RS13565	0.65	-0.1
3,071,417	+		PFLU_RS13565	0.65	+2.5
3,071,417	+		PFLU_RS13565	0.65	-0.9
3,071,417	+		PFLU_RS13565	0.65	-1.5
3,071,417	+		PFLU_RS13565	0.65	-0.0
3,071,417	+		PFLU_RS13565	0.65	-0.5
3,071,417	+		PFLU_RS13565	0.65	-1.8
3,071,417	+		PFLU_RS13565	0.65	-0.6
3,071,417	+		PFLU_RS13565	0.65	-0.6
3,071,417	+		PFLU_RS13565	0.65	-1.0
3,071,417	+		PFLU_RS13565	0.65	+0.6
3,071,417	+		PFLU_RS13565	0.65	-0.7
3,071,417	+		PFLU_RS13565	0.65	+2.8
3,071,417	+		PFLU_RS13565	0.65	+0.4
3,071,417	+		PFLU_RS13565	0.65	-0.8
3,071,417	+		PFLU_RS13565	0.65	+2.0
3,071,417	+		PFLU_RS13565	0.65	-0.1
3,071,417	+		PFLU_RS13565	0.65	-0.2
3,071,417	+		PFLU_RS13565	0.65	-0.3
3,071,418	-		PFLU_RS13565	0.65	+1.3
3,071,418	-		PFLU_RS13565	0.65	-0.5
3,071,418	-		PFLU_RS13565	0.65	-0.6
3,071,418	-		PFLU_RS13565	0.65	+0.5
3,071,418	-		PFLU_RS13565	0.65	+0.4
3,071,418	-		PFLU_RS13565	0.65	+0.0
3,071,418	-		PFLU_RS13565	0.65	-0.1
3,071,418	-		PFLU_RS13565	0.65	+1.1
3,071,418	-		PFLU_RS13565	0.65	+1.8
3,071,418	-		PFLU_RS13565	0.65	-0.6
3,071,426	+		PFLU_RS13565	0.66	+0.5
3,071,426	+		PFLU_RS13565	0.66	+0.0
3,071,427	-		PFLU_RS13565	0.66	-0.3
3,071,470	+		PFLU_RS13565	0.72	-0.3
3,071,471	-		PFLU_RS13565	0.72	+0.8
3,071,599	+				+0.2
3,071,599	+				-0.9
3,071,599	+				-1.0
3,071,599	+				+1.8
3,071,599	+				-0.7
3,071,599	+				-0.2
3,071,600	-				+0.0
3,071,600	-				-0.4
3,071,650	+				-1.3
3,071,650	+				-1.8
3,071,650	+				-0.9
3,071,651	-				-0.7
3,071,651	-				+0.7
3,071,651	-				-0.8
3,071,651	-				-0.1
3,071,743	+				+1.2
3,071,744	-				+0.2
3,071,761	+				+0.9
3,071,783	+				+0.7
3,071,784	-				+0.7
3,071,790	+				-0.2
3,071,791	-				+0.7
3,071,791	-				-0.1
3,071,791	-				-1.2
3,071,791	-				-1.5
3,071,795	+				-0.5
3,071,795	+				+1.0
3,071,796	-				+0.2
3,071,796	-				-0.4
3,071,847	-				-0.2
3,071,866	+				+0.2
3,071,866	+				+0.7
3,071,866	+				-0.8
3,071,867	-				-0.5
3,072,036	+		PFLU_RS13570	0.24	+0.1
3,072,036	+		PFLU_RS13570	0.24	-0.7
3,072,037	-		PFLU_RS13570	0.24	+0.9
3,072,239	+		PFLU_RS13570	0.46	-0.0
3,072,239	+		PFLU_RS13570	0.46	-1.5
3,072,239	+		PFLU_RS13570	0.46	-0.5
3,072,239	+		PFLU_RS13570	0.46	+0.6
3,072,239	+		PFLU_RS13570	0.46	+2.0
3,072,239	+		PFLU_RS13570	0.46	-0.1
3,072,239	+		PFLU_RS13570	0.46	-1.1
3,072,240	-		PFLU_RS13570	0.46	-0.3
3,072,240	-		PFLU_RS13570	0.46	-0.2
3,072,240	-		PFLU_RS13570	0.46	+0.7
3,072,240	-		PFLU_RS13570	0.46	+1.1
3,072,240	-		PFLU_RS13570	0.46	-1.5
3,072,240	-		PFLU_RS13570	0.46	+0.6
3,072,289	-		PFLU_RS13570	0.51	+0.5
3,072,319	+		PFLU_RS13570	0.55	+0.5
3,072,319	+		PFLU_RS13570	0.55	+0.2
3,072,349	-		PFLU_RS13570	0.58	-0.3
3,072,480	+		PFLU_RS13570	0.72	+0.5
3,072,480	+		PFLU_RS13570	0.72	-0.0
3,072,481	-		PFLU_RS13570	0.72	-0.2
3,072,481	-		PFLU_RS13570	0.72	+0.1
3,072,481	-		PFLU_RS13570	0.72	-0.0
3,072,504	+		PFLU_RS13570	0.75	-0.3
3,072,504	+		PFLU_RS13570	0.75	+0.2
3,072,504	+		PFLU_RS13570	0.75	+0.4
3,072,504	+		PFLU_RS13570	0.75	-0.4
3,072,504	+		PFLU_RS13570	0.75	-0.8
3,072,504	+		PFLU_RS13570	0.75	+0.8
3,072,504	+		PFLU_RS13570	0.75	-1.9
3,072,504	+		PFLU_RS13570	0.75	-0.2
3,072,504	+		PFLU_RS13570	0.75	-1.5
3,072,504	+		PFLU_RS13570	0.75	-0.0
3,072,505	-		PFLU_RS13570	0.75	+0.5
3,072,505	-		PFLU_RS13570	0.75	+1.0
3,072,505	-		PFLU_RS13570	0.75	+1.1
3,072,505	-		PFLU_RS13570	0.75	-0.8
3,072,505	-		PFLU_RS13570	0.75	+0.0
3,072,505	-		PFLU_RS13570	0.75	-1.0
3,072,505	-		PFLU_RS13570	0.75	-1.3
3,072,505	-		PFLU_RS13570	0.75	+1.4
3,072,605	+		PFLU_RS13570	0.86	-1.9
3,072,605	+		PFLU_RS13570	0.86	+0.1
3,072,605	+		PFLU_RS13570	0.86	+0.0
3,072,606	-		PFLU_RS13570	0.86	+0.2
3,072,737	+				+1.0
3,072,903	+				+1.4
3,072,904	-				-0.9
3,072,904	-				-1.9
3,072,960	+		PFLU_RS13575	0.12	-0.3
3,072,960	+		PFLU_RS13575	0.12	-0.6
3,072,960	+		PFLU_RS13575	0.12	+0.9
3,072,960	+		PFLU_RS13575	0.12	+1.2
3,072,960	+		PFLU_RS13575	0.12	+0.8
3,072,960	+		PFLU_RS13575	0.12	-0.5
3,072,960	+		PFLU_RS13575	0.12	-1.7
3,072,960	+		PFLU_RS13575	0.12	-0.6
3,072,960	+		PFLU_RS13575	0.12	+0.7
3,072,960	+		PFLU_RS13575	0.12	+0.2
3,072,961	-		PFLU_RS13575	0.12	-0.3
3,072,961	-		PFLU_RS13575	0.12	+0.0
3,072,961	-		PFLU_RS13575	0.12	-0.9
3,072,961	-		PFLU_RS13575	0.12	-0.9
3,072,969	+		PFLU_RS13575	0.14	-0.5
3,072,969	+		PFLU_RS13575	0.14	-0.1
3,072,969	+		PFLU_RS13575	0.14	+0.5
3,072,970	-		PFLU_RS13575	0.14	+0.1
3,072,970	-		PFLU_RS13575	0.14	+0.6
3,073,065	+		PFLU_RS13575	0.33	-0.2
3,073,066	-		PFLU_RS13575	0.34	-0.3
3,073,114	-		PFLU_RS13575	0.43	-1.0
3,073,114	-		PFLU_RS13575	0.43	-1.6
3,073,125	+		PFLU_RS13575	0.46	-2.9
3,073,126	-		PFLU_RS13575	0.46	+0.2
3,073,275	+		PFLU_RS13575	0.76	-0.0
3,073,276	-		PFLU_RS13575	0.76	+2.4
3,073,390	+				+0.2
3,073,390	+				-1.5
3,073,390	+				+0.2
3,073,390	+				+0.6
3,073,390	+				-0.8
3,073,390	+				+1.2
3,073,391	-				+0.9
3,073,391	-				-0.7
3,073,391	-				-0.6
3,073,391	-				-1.6
3,073,391	-				-0.8
3,073,391	-				-0.8
3,073,391	-				+1.0
3,073,391	-				+0.6
3,073,391	-				+0.8
3,073,412	+				-1.5
3,073,412	+				-0.5
3,073,412	+				-0.6
3,073,412	+				+0.1
3,073,412	+				+0.3
3,073,412	+				-1.3
3,073,412	+				+1.2
3,073,412	+				-0.7
3,073,412	+				-1.8
3,073,412	+				-1.0
3,073,412	+				-0.7
3,073,412	+				-0.2
3,073,412	+				-0.9
3,073,412	+				+0.5
3,073,413	-				+2.8
3,073,413	-				-1.4
3,073,413	-				+0.9
3,073,413	-				+0.2
3,073,413	-				-0.3
3,073,413	-				+0.5
3,073,413	-				-0.7
3,073,414	+				-0.3
3,073,415	-				-1.5
3,073,572	+				-0.3
3,073,573	-				-2.5