Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003217

Experiment: RCH2_defined_glucose_5mM with Adenine 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Adenine 2 mM
3,638,501	+		ABIE53_003216	0.72	+1.0
3,638,501	+		ABIE53_003216	0.72	+0.6
3,638,501	+		ABIE53_003216	0.72	+2.4
3,638,501	+		ABIE53_003216	0.72	-0.3
3,638,502	-		ABIE53_003216	0.72	-1.1
3,638,502	-		ABIE53_003216	0.72	+0.1
3,638,502	-		ABIE53_003216	0.72	+2.5
3,638,502	-		ABIE53_003216	0.72	+0.6
3,638,609	+		ABIE53_003216	0.76	+2.1
3,638,610	-		ABIE53_003216	0.76	+1.1
3,638,610	-		ABIE53_003216	0.76	+1.6
3,638,636	+		ABIE53_003216	0.77	+1.1
3,638,636	+		ABIE53_003216	0.77	+3.6
3,638,636	+		ABIE53_003216	0.77	+0.2
3,638,636	+		ABIE53_003216	0.77	+2.2
3,638,636	+		ABIE53_003216	0.77	-0.2
3,638,637	-		ABIE53_003216	0.77	-0.1
3,638,637	-		ABIE53_003216	0.77	+0.1
3,638,637	-		ABIE53_003216	0.77	+0.5
3,638,637	-		ABIE53_003216	0.77	-0.8
3,638,640	+		ABIE53_003216	0.77	+0.1
3,638,640	+		ABIE53_003216	0.77	-0.8
3,638,640	+		ABIE53_003216	0.77	+1.1
3,638,641	-		ABIE53_003216	0.77	+1.5
3,638,641	-		ABIE53_003216	0.77	+2.1
3,638,641	-		ABIE53_003216	0.77	-0.2
3,638,641	-		ABIE53_003216	0.77	-0.3
3,638,641	-		ABIE53_003216	0.77	+0.6
3,638,693	+		ABIE53_003216	0.79	+0.8
3,638,693	+		ABIE53_003216	0.79	+0.8
3,638,693	+		ABIE53_003216	0.79	+2.5
3,638,693	+		ABIE53_003216	0.79	+2.8
3,638,694	-		ABIE53_003216	0.79	+0.1
3,638,694	-		ABIE53_003216	0.79	+0.4
3,638,747	+		ABIE53_003216	0.81	-0.2
3,638,747	+		ABIE53_003216	0.81	+0.3
3,638,748	-		ABIE53_003216	0.81	-0.2
3,639,075	-				-0.0
3,639,115	+				+0.8
3,639,115	+				-0.3
3,639,115	+				-0.7
3,639,116	-				+1.1
3,639,116	-				+0.6
3,639,116	-				+2.1
3,639,116	-				+1.1
3,639,116	-				+1.1
3,639,395	-				-0.9
3,639,395	-				-0.9
3,639,417	-				+0.5
3,639,467	+				+0.7
3,639,495	+		ABIE53_003217	0.15	+1.3
3,639,543	+		ABIE53_003217	0.31	-1.1
3,639,543	+		ABIE53_003217	0.31	-1.3
3,639,544	-		ABIE53_003217	0.31	-0.2
3,639,600	+		ABIE53_003217	0.50	-0.5
3,639,600	+		ABIE53_003217	0.50	+1.0
3,639,600	+		ABIE53_003217	0.50	+0.7
3,639,600	+		ABIE53_003217	0.50	-0.0
3,639,600	+		ABIE53_003217	0.50	+1.1
3,639,600	+		ABIE53_003217	0.50	+1.1
3,639,601	-		ABIE53_003217	0.50	-0.6
3,639,601	-		ABIE53_003217	0.50	-0.1
3,639,601	-		ABIE53_003217	0.50	+2.1
3,639,601	-		ABIE53_003217	0.50	-0.3
3,639,601	-		ABIE53_003217	0.50	-1.6
3,639,601	-		ABIE53_003217	0.50	-0.9
3,639,705	+		ABIE53_003217	0.85	-1.6
3,639,742	+				-1.1
3,639,742	+				-1.4
3,639,742	+				-0.3
3,639,743	-				+1.8
3,639,743	-				-0.8
3,640,043	+		ABIE53_003218	0.64	-1.6
3,640,043	+		ABIE53_003218	0.64	-1.1
3,640,261	+				-2.6
3,640,261	+				-0.2