Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001315
Experiment: RCH2_defined_glucose_5mM with Adenine 2 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | RCH2_defined_glucose_5mM with Adenine 2 mM |
---|---|---|---|---|---|
remove | |||||
1,471,196 | + | ABIE53_001314 | 0.86 | -2.5 | |
1,471,691 | + | -1.2 | |||
1,471,691 | + | -0.0 | |||
1,471,707 | - | -2.3 | |||
1,471,758 | + | -0.0 | |||
1,471,759 | - | -0.7 | |||
1,471,813 | - | +1.5 | |||
1,471,927 | + | -2.0 | |||
1,472,021 | - | -0.0 | |||
1,472,021 | - | +0.7 | |||
1,472,087 | + | -1.1 | |||
1,472,087 | + | -0.4 | |||
1,472,100 | + | -0.3 | |||
1,472,100 | + | -1.0 | |||
1,472,100 | + | +1.0 | |||
1,472,100 | + | -1.5 | |||
1,472,100 | + | -2.7 | |||
1,472,129 | + | -2.6 | |||
1,472,129 | + | +1.0 | |||
1,473,196 | + | -0.4 | |||
1,473,962 | + | ABIE53_001316 | 0.40 | +0.4 | |
1,474,024 | + | ABIE53_001316 | 0.43 | +0.1 | |
1,474,024 | + | ABIE53_001316 | 0.43 | +1.3 | |
1,474,024 | + | ABIE53_001316 | 0.43 | -0.7 | |
1,474,024 | + | ABIE53_001316 | 0.43 | -1.0 | |
1,474,025 | - | ABIE53_001316 | 0.43 | -4.3 |
Or see this region's nucleotide sequence