Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001312

Experiment: RCH2_defined_glucose_5mM with Adenine 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Adenine 2 mM
1,466,326	-				-0.0
1,466,326	-				+0.0
1,466,326	-				-0.4
1,466,326	-				-1.1
1,466,326	-				-0.4
1,466,360	-				+0.4
1,466,360	-				-1.9
1,466,360	-				+2.0
1,466,360	-				+2.4
1,466,455	+				-1.0
1,466,456	-				+0.1
1,466,624	-				+0.4
1,466,866	+		ABIE53_001312	0.38	-0.0
1,466,866	+		ABIE53_001312	0.38	-0.6
1,466,866	+		ABIE53_001312	0.38	-0.5
1,466,866	+		ABIE53_001312	0.38	-1.6
1,466,867	-		ABIE53_001312	0.38	-1.1
1,466,968	+		ABIE53_001312	0.51	-1.4
1,466,968	+		ABIE53_001312	0.51	-2.0
1,466,968	+		ABIE53_001312	0.51	-0.9
1,466,969	-		ABIE53_001312	0.51	-0.0
1,466,969	-		ABIE53_001312	0.51	-1.4
1,466,969	-		ABIE53_001312	0.51	-0.4
1,467,076	+		ABIE53_001312	0.64	-1.6
1,467,076	+		ABIE53_001312	0.64	-2.3
1,467,076	+		ABIE53_001312	0.64	-1.4
1,467,076	+		ABIE53_001312	0.64	-3.3
1,467,077	-		ABIE53_001312	0.64	-2.5
1,467,077	-		ABIE53_001312	0.64	-2.4
1,467,172	+		ABIE53_001312	0.76	-0.5
1,467,172	+		ABIE53_001312	0.76	-2.7
1,467,172	+		ABIE53_001312	0.76	-3.9
1,467,172	+		ABIE53_001312	0.76	+0.4
1,467,173	-		ABIE53_001312	0.76	-0.4
1,467,173	-		ABIE53_001312	0.76	-1.0
1,467,173	-		ABIE53_001312	0.76	-2.2
1,467,173	-		ABIE53_001312	0.76	-1.6
1,467,297	-				-1.6
1,467,297	-				-3.3
1,467,411	+				-0.6
1,467,411	+				+2.0
1,467,412	-				+1.2
1,467,412	-				+0.4
1,467,412	-				+2.2
1,467,412	-				+2.0
1,467,412	-				+0.0
1,467,415	+				-0.6
1,467,416	-				+0.1
1,467,424	-				+0.2
1,467,458	+				-1.4
1,467,458	+				+1.6
1,467,458	+				+3.4
1,467,458	+				+0.6
1,467,458	+				+2.5
1,467,458	+				-0.7
1,467,459	-				-0.3
1,467,459	-				-0.6
1,467,459	-				+0.2
1,467,459	-				-0.4
1,467,507	+				-0.1
1,467,507	+				+0.5
1,467,507	+				-0.2
1,467,507	+				-1.7
1,467,508	-				-2.3
1,467,508	-				-1.7
1,467,508	-				-0.2
1,467,553	+				-0.1
1,467,554	-				+0.2
1,467,554	-				+1.4
1,467,554	-				-0.8
1,467,609	+				-0.9
1,467,610	-				-0.9
1,467,610	-				-0.5
1,467,610	-				-0.5
1,467,610	-				-0.3
1,467,762	+		ABIE53_001313	0.27	-1.6
1,467,762	+		ABIE53_001313	0.27	+0.3
1,467,763	-		ABIE53_001313	0.27	+4.0
1,467,763	-		ABIE53_001313	0.27	+1.0
1,467,827	+		ABIE53_001313	0.36	-1.0
1,468,071	+		ABIE53_001313	0.68	+0.4
1,468,072	-		ABIE53_001313	0.68	+0.4
1,468,072	-		ABIE53_001313	0.68	-0.6
1,468,142	+		ABIE53_001313	0.78	+1.0
1,468,143	-		ABIE53_001313	0.78	-1.4
1,468,248	+				+0.5
1,468,249	-				-1.4
1,468,249	-				-0.2
1,468,249	-				-0.7
1,468,308	+				+2.0